Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RFT1Q96AA3 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
RFT1Q96AA3 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
RFT1Q96AA3 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RFT1Q96AA3 AC117409.1-201ENST00000470499 1310 ntBASIC4.92□□□□□ -1.62
RFT1Q96AA3 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
RFT1Q96AA3 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
RFT1Q96AA3 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RFT1Q96AA3 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RFT1Q96AA3 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC4.91□□□□□ -1.62
RFT1Q96AA3 CASC19-221ENST00000641309 1382 ntBASIC4.91□□□□□ -1.62
RFT1Q96AA3 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RFT1Q96AA3 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
RFT1Q96AA3 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RFT1Q96AA3 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
RFT1Q96AA3 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
RFT1Q96AA3 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
RFT1Q96AA3 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC4.91□□□□□ -1.62
RFT1Q96AA3 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RFT1Q96AA3 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
RFT1Q96AA3 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RFT1Q96AA3 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RFT1Q96AA3 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.91□□□□□ -1.62
RFT1Q96AA3 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.91□□□□□ -1.62
RFT1Q96AA3 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
RFT1Q96AA3 MIR130A-201ENST00000385274 89 ntBASIC4.91□□□□□ -1.62
RFT1Q96AA3 AC005042.1-201ENST00000393397 800 ntBASIC4.91□□□□□ -1.62
RFT1Q96AA3 AC104297.1-201ENST00000393779 870 ntBASIC4.91□□□□□ -1.62
RFT1Q96AA3 HMGB3P7-201ENST00000400214 611 ntBASIC4.91□□□□□ -1.62
RFT1Q96AA3 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
RFT1Q96AA3 CTSL3P-202ENST00000412179 788 ntBASIC4.91□□□□□ -1.62
RFT1Q96AA3 RNF10P1-201ENST00000418589 369 ntBASIC4.91□□□□□ -1.62
RFT1Q96AA3 NENFP1-201ENST00000419476 466 ntBASIC4.91□□□□□ -1.62
RFT1Q96AA3 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.91□□□□□ -1.62
RFT1Q96AA3 PNKDP1-201ENST00000435914 430 ntBASIC4.91□□□□□ -1.62
RFT1Q96AA3 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.91□□□□□ -1.62
RFT1Q96AA3 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.91□□□□□ -1.62
RFT1Q96AA3 RPS15AP29-201ENST00000445539 400 ntBASIC4.91□□□□□ -1.62
RFT1Q96AA3 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC4.91□□□□□ -1.62
RFT1Q96AA3 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.91□□□□□ -1.62
RFT1Q96AA3 EEF1B2P3-201ENST00000447718 678 ntBASIC4.91□□□□□ -1.62
RFT1Q96AA3 AP002345.1-201ENST00000456493 928 ntBASIC4.91□□□□□ -1.62
RFT1Q96AA3 AC104339.1-201ENST00000465478 348 ntBASIC4.91□□□□□ -1.62
RFT1Q96AA3 RN7SL57P-201ENST00000493687 290 ntBASIC4.91□□□□□ -1.62
RFT1Q96AA3 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.91□□□□□ -1.62
RFT1Q96AA3 GAPDHP71-201ENST00000511530 1003 ntBASIC4.91□□□□□ -1.62
RFT1Q96AA3 MTND2P31-201ENST00000512602 616 ntBASIC4.91□□□□□ -1.62
RFT1Q96AA3 AC016550.3-201ENST00000515706 767 ntBASIC4.91□□□□□ -1.62
RFT1Q96AA3 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.91□□□□□ -1.62
RFT1Q96AA3 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.91□□□□□ -1.62
RFT1Q96AA3 AC006530.1-201ENST00000555980 571 ntBASIC4.91□□□□□ -1.62
RFT1Q96AA3 AC091078.2-201ENST00000557145 559 ntBASIC4.91□□□□□ -1.62
RFT1Q96AA3 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.91□□□□□ -1.62
RFT1Q96AA3 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC4.91□□□□□ -1.62
RFT1Q96AA3 AC084759.1-201ENST00000561168 290 ntBASIC4.91□□□□□ -1.62
RFT1Q96AA3 AL731537.2-201ENST00000561565 951 ntBASIC4.91□□□□□ -1.62
RFT1Q96AA3 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC4.91□□□□□ -1.62
RFT1Q96AA3 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
RFT1Q96AA3 AL390726.5-202ENST00000564800 256 ntBASIC4.91□□□□□ -1.62
RFT1Q96AA3 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.91□□□□□ -1.62
RFT1Q96AA3 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
RFT1Q96AA3 MIR744-201ENST00000578242 98 ntBASIC4.91□□□□□ -1.62
RFT1Q96AA3 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC4.91□□□□□ -1.62
RFT1Q96AA3 AC108673.3-201ENST00000609183 335 ntBASIC4.91□□□□□ -1.62
RFT1Q96AA3 AP005131.7-201ENST00000610087 611 ntBASIC4.91□□□□□ -1.62
RFT1Q96AA3 AL121890.2-201ENST00000617644 465 ntBASIC4.91□□□□□ -1.62
RFT1Q96AA3 AC245014.3-201ENST00000618589 347 ntBASIC4.91□□□□□ -1.62
RFT1Q96AA3 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.91□□□□□ -1.62
RFT1Q96AA3 AP001005.3-201ENST00000622049 129 ntBASIC4.91□□□□□ -1.62
RFT1Q96AA3 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.91□□□□□ -1.62
RFT1Q96AA3 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RFT1Q96AA3 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
RFT1Q96AA3 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RFT1Q96AA3 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.91□□□□□ -1.62
RFT1Q96AA3 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RFT1Q96AA3 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.91□□□□□ -1.62
RFT1Q96AA3 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RFT1Q96AA3 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RFT1Q96AA3 AC132825.1-201ENST00000463573 2247 ntBASIC4.91□□□□□ -1.62
RFT1Q96AA3 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.9□□□□□ -1.62
RFT1Q96AA3 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.9□□□□□ -1.62
RFT1Q96AA3 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.9□□□□□ -1.62
RFT1Q96AA3 STX3-208ENST00000641815 3236 ntBASIC4.9□□□□□ -1.62
RFT1Q96AA3 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.9□□□□□ -1.62
RFT1Q96AA3 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.9□□□□□ -1.62
RFT1Q96AA3 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
RFT1Q96AA3 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RFT1Q96AA3 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
RFT1Q96AA3 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RFT1Q96AA3 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RFT1Q96AA3 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RFT1Q96AA3 TMSB4XP2-201ENST00000335179 210 ntBASIC4.9□□□□□ -1.63
RFT1Q96AA3 MT-TP-201ENST00000387461 68 ntBASIC4.9□□□□□ -1.63
RFT1Q96AA3 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
RFT1Q96AA3 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RFT1Q96AA3 RPL5P19-201ENST00000404228 893 ntBASIC4.9□□□□□ -1.63
RFT1Q96AA3 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.9□□□□□ -1.63
RFT1Q96AA3 NPM1P40-201ENST00000412758 733 ntBASIC4.9□□□□□ -1.63
RFT1Q96AA3 MRPL53P1-201ENST00000414323 319 ntBASIC4.9□□□□□ -1.63
RFT1Q96AA3 AC019205.1-201ENST00000421830 730 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms