Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC084824.4-201ENST00000620106 731 ntBASIC7□□□□□ -1.29
SMC1BQ8NDV3 AL137067.2-201ENST00000621202 131 ntBASIC7□□□□□ -1.29
SMC1BQ8NDV3 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC7□□□□□ -1.29
SMC1BQ8NDV3 AC093875.1-201ENST00000623688 504 ntBASIC7□□□□□ -1.29
SMC1BQ8NDV3 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC7□□□□□ -1.29
SMC1BQ8NDV3 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SMC1BQ8NDV3 AC110597.1-201ENST00000562669 3176 ntBASIC7□□□□□ -1.29
SMC1BQ8NDV3 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
SMC1BQ8NDV3 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SMC1BQ8NDV3 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7□□□□□ -1.29
SMC1BQ8NDV3 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SMC1BQ8NDV3 MRE11P1-201ENST00000464884 2127 ntBASIC7□□□□□ -1.29
SMC1BQ8NDV3 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 AL158050.1-201ENST00000416077 457 ntBASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 RPL23AP18-201ENST00000416139 468 ntBASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 AL139415.1-201ENST00000424862 352 ntBASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 LDHAP2-201ENST00000437325 985 ntBASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 RRM2P4-201ENST00000441721 562 ntBASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 AC073648.4-201ENST00000442655 781 ntBASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 RPL7P33-201ENST00000444159 742 ntBASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 TPT1P12-201ENST00000448968 492 ntBASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 AC008379.1-201ENST00000463655 464 ntBASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 AC021087.2-201ENST00000504656 1203 ntBASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 AC021451.1-201ENST00000523498 1129 ntBASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 PCNPP1-201ENST00000552501 511 ntBASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 AC025918.2-201ENST00000558683 763 ntBASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 MIR3934-201ENST00000579806 107 ntBASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 SS18L2P2-201ENST00000583960 235 ntBASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 AC006116.3-201ENST00000592968 361 ntBASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 AC087283.1-201ENST00000604029 1074 ntBASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 RMST_5.1-201ENST00000618704 126 ntBASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 AP002505.2-201ENST00000623585 696 ntBASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 AC022905.1-201ENST00000503430 3048 ntBASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 AL132656.3-201ENST00000606384 1595 ntBASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 NEK2P4-201ENST00000425793 1329 ntBASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 AL512310.3-201ENST00000547023 1335 ntBASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
SMC1BQ8NDV3 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.98□□□□□ -1.29
SMC1BQ8NDV3 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
SMC1BQ8NDV3 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.98□□□□□ -1.29
SMC1BQ8NDV3 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.98□□□□□ -1.29
SMC1BQ8NDV3 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.98□□□□□ -1.29
SMC1BQ8NDV3 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.98□□□□□ -1.29
SMC1BQ8NDV3 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.98□□□□□ -1.29
SMC1BQ8NDV3 SAMM50P1-201ENST00000455403 1399 ntBASIC6.98□□□□□ -1.29
SMC1BQ8NDV3 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
SMC1BQ8NDV3 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.98□□□□□ -1.29
SMC1BQ8NDV3 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.98□□□□□ -1.29
SMC1BQ8NDV3 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
SMC1BQ8NDV3 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.98□□□□□ -1.29
SMC1BQ8NDV3 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.98□□□□□ -1.29
SMC1BQ8NDV3 OR10R3P-201ENST00000361688 942 ntBASIC6.98□□□□□ -1.29
SMC1BQ8NDV3 RNA5SP478-201ENST00000364657 115 ntBASIC6.98□□□□□ -1.29
SMC1BQ8NDV3 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
SMC1BQ8NDV3 RNU1-77P-201ENST00000390868 162 ntBASIC6.98□□□□□ -1.29
SMC1BQ8NDV3 AL050335.1-201ENST00000396909 869 ntBASIC6.98□□□□□ -1.29
SMC1BQ8NDV3 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.98□□□□□ -1.29
SMC1BQ8NDV3 AL158827.1-201ENST00000416300 391 ntBASIC6.98□□□□□ -1.29
SMC1BQ8NDV3 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SMC1BQ8NDV3 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.98□□□□□ -1.29
SMC1BQ8NDV3 TPTE2P3-201ENST00000441562 1189 ntBASIC6.98□□□□□ -1.29
SMC1BQ8NDV3 AC128716.1-201ENST00000475129 166 ntBASIC6.98□□□□□ -1.29
SMC1BQ8NDV3 RPS3AP6-201ENST00000484430 795 ntBASIC6.98□□□□□ -1.29
SMC1BQ8NDV3 AC010376.1-201ENST00000522101 334 ntBASIC6.98□□□□□ -1.29
SMC1BQ8NDV3 AP003066.2-201ENST00000529375 555 ntBASIC6.98□□□□□ -1.29
SMC1BQ8NDV3 BRD9P1-201ENST00000529855 560 ntBASIC6.98□□□□□ -1.29
SMC1BQ8NDV3 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC6.98□□□□□ -1.29
SMC1BQ8NDV3 RPA2P3-201ENST00000533268 770 ntBASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms