Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC6.81□□□□□ -1.32
SYNE4Q8N205 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC6.81□□□□□ -1.32
SYNE4Q8N205 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.81□□□□□ -1.32
SYNE4Q8N205 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.81□□□□□ -1.32
SYNE4Q8N205 HMGB1P40-201ENST00000525121 540 ntBASIC6.81□□□□□ -1.32
SYNE4Q8N205 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.81□□□□□ -1.32
SYNE4Q8N205 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.81□□□□□ -1.32
SYNE4Q8N205 AC104072.1-201ENST00000568817 668 ntBASIC6.81□□□□□ -1.32
SYNE4Q8N205 AL163952.1-202ENST00000569625 600 ntBASIC6.81□□□□□ -1.32
SYNE4Q8N205 AC005776.1-201ENST00000603164 290 ntBASIC6.81□□□□□ -1.32
SYNE4Q8N205 AC112220.2-201ENST00000605513 533 ntBASIC6.81□□□□□ -1.32
SYNE4Q8N205 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.81□□□□□ -1.32
SYNE4Q8N205 AC097504.2-201ENST00000608088 454 ntBASIC6.81□□□□□ -1.32
SYNE4Q8N205 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.81□□□□□ -1.32
SYNE4Q8N205 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.81□□□□□ -1.32
SYNE4Q8N205 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
SYNE4Q8N205 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE4Q8N205 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE4Q8N205 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE4Q8N205 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
SYNE4Q8N205 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
SYNE4Q8N205 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SYNE4Q8N205 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SYNE4Q8N205 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.8□□□□□ -1.32
SYNE4Q8N205 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SYNE4Q8N205 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SYNE4Q8N205 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SYNE4Q8N205 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SYNE4Q8N205 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
SYNE4Q8N205 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC6.8□□□□□ -1.32
SYNE4Q8N205 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC6.8□□□□□ -1.32
SYNE4Q8N205 VDAC1P6-201ENST00000430062 855 ntBASIC6.8□□□□□ -1.32
SYNE4Q8N205 AC011242.1-201ENST00000433596 1158 ntBASIC6.8□□□□□ -1.32
SYNE4Q8N205 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.8□□□□□ -1.32
SYNE4Q8N205 AL691517.1-201ENST00000440833 1235 ntBASIC6.8□□□□□ -1.32
SYNE4Q8N205 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.8□□□□□ -1.32
SYNE4Q8N205 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.8□□□□□ -1.32
SYNE4Q8N205 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.8□□□□□ -1.32
SYNE4Q8N205 MTND6P2-201ENST00000512226 524 ntBASIC6.8□□□□□ -1.32
SYNE4Q8N205 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.8□□□□□ -1.32
SYNE4Q8N205 PMS2P3-207ENST00000529061 717 ntBASIC6.8□□□□□ -1.32
SYNE4Q8N205 VBP1-203ENST00000535916 944 ntTSL 2 BASIC6.8□□□□□ -1.32
SYNE4Q8N205 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC6.8□□□□□ -1.32
SYNE4Q8N205 NMNAT1P5-201ENST00000559657 841 ntBASIC6.8□□□□□ -1.32
SYNE4Q8N205 AC090888.2-201ENST00000559765 1144 ntBASIC6.8□□□□□ -1.32
SYNE4Q8N205 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC6.8□□□□□ -1.32
SYNE4Q8N205 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.8□□□□□ -1.32
SYNE4Q8N205 BNIP3P38-201ENST00000601117 544 ntBASIC6.8□□□□□ -1.32
SYNE4Q8N205 SNORA35B-201ENST00000607417 129 ntBASIC6.8□□□□□ -1.32
SYNE4Q8N205 FAM25E-202ENST00000608562 189 ntBASIC6.8□□□□□ -1.32
SYNE4Q8N205 AC091953.3-201ENST00000623220 236 ntBASIC6.8□□□□□ -1.32
SYNE4Q8N205 AC120349.3-201ENST00000624377 529 ntBASIC6.8□□□□□ -1.32
SYNE4Q8N205 AL109659.3-201ENST00000624985 950 ntBASIC6.8□□□□□ -1.32
SYNE4Q8N205 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
SYNE4Q8N205 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.8□□□□□ -1.32
SYNE4Q8N205 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
SYNE4Q8N205 FTO-203ENST00000460382 1517 ntTSL 5 BASIC6.8□□□□□ -1.32
SYNE4Q8N205 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.8□□□□□ -1.32
SYNE4Q8N205 AP001002.1-201ENST00000625148 1513 ntBASIC6.8□□□□□ -1.32
SYNE4Q8N205 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
SYNE4Q8N205 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
SYNE4Q8N205 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SYNE4Q8N205 AL034546.1-201ENST00000623740 3693 ntBASIC6.79□□□□□ -1.32
SYNE4Q8N205 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE4Q8N205 MAPK10-270ENST00000641102 3538 ntBASIC6.79□□□□□ -1.32
SYNE4Q8N205 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
SYNE4Q8N205 AC110716.2-201ENST00000563865 3945 ntBASIC6.79□□□□□ -1.32
SYNE4Q8N205 CASC19-281ENST00000642118 1554 ntBASIC6.79□□□□□ -1.32
SYNE4Q8N205 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.79□□□□□ -1.32
SYNE4Q8N205 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
SYNE4Q8N205 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.79□□□□□ -1.32
SYNE4Q8N205 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC6.79□□□□□ -1.32
SYNE4Q8N205 AL035419.1-201ENST00000397037 564 ntBASIC6.79□□□□□ -1.32
SYNE4Q8N205 RPS3AP25-201ENST00000411660 793 ntBASIC6.79□□□□□ -1.32
SYNE4Q8N205 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC6.79□□□□□ -1.32
SYNE4Q8N205 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE4Q8N205 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.79□□□□□ -1.32
SYNE4Q8N205 TMEM183AP1-205ENST00000432739 290 ntBASIC6.79□□□□□ -1.32
SYNE4Q8N205 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC6.79□□□□□ -1.32
SYNE4Q8N205 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.79□□□□□ -1.32
SYNE4Q8N205 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC6.79□□□□□ -1.32
SYNE4Q8N205 RPS29P22-201ENST00000472363 168 ntBASIC6.79□□□□□ -1.32
SYNE4Q8N205 AC090114.3-201ENST00000479267 829 ntBASIC6.79□□□□□ -1.32
SYNE4Q8N205 HMGB1P44-201ENST00000508597 572 ntBASIC6.79□□□□□ -1.32
SYNE4Q8N205 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.79□□□□□ -1.32
SYNE4Q8N205 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC6.79□□□□□ -1.32
SYNE4Q8N205 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.79□□□□□ -1.32
SYNE4Q8N205 SCARNA16.4-201ENST00000516956 187 ntBASIC6.79□□□□□ -1.32
SYNE4Q8N205 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.79□□□□□ -1.32
SYNE4Q8N205 AC079075.1-201ENST00000559543 878 ntBASIC6.79□□□□□ -1.32
SYNE4Q8N205 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.79□□□□□ -1.32
SYNE4Q8N205 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.79□□□□□ -1.32
SYNE4Q8N205 MIR4697-201ENST00000582977 78 ntBASIC6.79□□□□□ -1.32
SYNE4Q8N205 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC6.79□□□□□ -1.32
SYNE4Q8N205 AC025165.5-201ENST00000602802 578 ntBASIC6.79□□□□□ -1.32
SYNE4Q8N205 NANOGP3-201ENST00000605855 286 ntBASIC6.79□□□□□ -1.32
SYNE4Q8N205 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.79□□□□□ -1.32
SYNE4Q8N205 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC6.79□□□□□ -1.32
SYNE4Q8N205 MIR378J-201ENST00000611988 109 ntBASIC6.79□□□□□ -1.32
SYNE4Q8N205 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms