Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RTTNQ86VV8 AL078621.3-201ENST00000623707 2042 ntBASIC4.7□□□□□ -1.66
RTTNQ86VV8 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RTTNQ86VV8 HSPA8P14-201ENST00000552265 1805 ntBASIC4.7□□□□□ -1.66
RTTNQ86VV8 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RTTNQ86VV8 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.7□□□□□ -1.66
RTTNQ86VV8 AC005294.1-201ENST00000355509 281 ntBASIC4.7□□□□□ -1.66
RTTNQ86VV8 RNU1-146P-201ENST00000364015 165 ntBASIC4.7□□□□□ -1.66
RTTNQ86VV8 RNA5SP87-201ENST00000384155 118 ntBASIC4.7□□□□□ -1.66
RTTNQ86VV8 RPL7L1P9-201ENST00000431298 745 ntBASIC4.7□□□□□ -1.66
RTTNQ86VV8 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.7□□□□□ -1.66
RTTNQ86VV8 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.7□□□□□ -1.66
RTTNQ86VV8 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.7□□□□□ -1.66
RTTNQ86VV8 OR8Q1P-201ENST00000526467 655 ntBASIC4.7□□□□□ -1.66
RTTNQ86VV8 AC022832.1-201ENST00000530718 645 ntBASIC4.7□□□□□ -1.66
RTTNQ86VV8 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.7□□□□□ -1.66
RTTNQ86VV8 MIR3934-201ENST00000579806 107 ntBASIC4.7□□□□□ -1.66
RTTNQ86VV8 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.7□□□□□ -1.66
RTTNQ86VV8 AL162431.4-201ENST00000604674 411 ntBASIC4.7□□□□□ -1.66
RTTNQ86VV8 AC000095.2-202ENST00000637415 154 ntBASIC4.7□□□□□ -1.66
RTTNQ86VV8 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.7□□□□□ -1.66
RTTNQ86VV8 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.7□□□□□ -1.66
RTTNQ86VV8 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
RTTNQ86VV8 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
RTTNQ86VV8 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
RTTNQ86VV8 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
RTTNQ86VV8 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RTTNQ86VV8 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RTTNQ86VV8 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RTTNQ86VV8 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RTTNQ86VV8 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RTTNQ86VV8 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
RTTNQ86VV8 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
RTTNQ86VV8 AC068538.1-201ENST00000376856 336 ntBASIC4.69□□□□□ -1.66
RTTNQ86VV8 NOP56P2-201ENST00000447491 769 ntBASIC4.69□□□□□ -1.66
RTTNQ86VV8 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.69□□□□□ -1.66
RTTNQ86VV8 RPS18P6-201ENST00000476880 458 ntBASIC4.69□□□□□ -1.66
RTTNQ86VV8 AC079841.1-201ENST00000481228 950 ntBASIC4.69□□□□□ -1.66
RTTNQ86VV8 EIF1P7-201ENST00000487533 337 ntBASIC4.69□□□□□ -1.66
RTTNQ86VV8 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.69□□□□□ -1.66
RTTNQ86VV8 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.69□□□□□ -1.66
RTTNQ86VV8 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.69□□□□□ -1.66
RTTNQ86VV8 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.69□□□□□ -1.66
RTTNQ86VV8 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.69□□□□□ -1.66
RTTNQ86VV8 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC4.69□□□□□ -1.66
RTTNQ86VV8 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.69□□□□□ -1.66
RTTNQ86VV8 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC4.69□□□□□ -1.66
RTTNQ86VV8 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
RTTNQ86VV8 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RTTNQ86VV8 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RTTNQ86VV8 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RTTNQ86VV8 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
RTTNQ86VV8 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RTTNQ86VV8 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RTTNQ86VV8 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RTTNQ86VV8 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RTTNQ86VV8 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RTTNQ86VV8 RN7SKP17-201ENST00000411242 351 ntBASIC4.69□□□□□ -1.66
RTTNQ86VV8 C4BPAP2-201ENST00000428434 478 ntBASIC4.69□□□□□ -1.66
RTTNQ86VV8 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.69□□□□□ -1.66
RTTNQ86VV8 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.69□□□□□ -1.66
RTTNQ86VV8 AL672138.1-201ENST00000450604 1015 ntBASIC4.69□□□□□ -1.66
RTTNQ86VV8 AC090058.1-201ENST00000498788 435 ntBASIC4.69□□□□□ -1.66
RTTNQ86VV8 IGHVIII-47-1-201ENST00000518187 331 ntBASIC4.69□□□□□ -1.66
RTTNQ86VV8 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.69□□□□□ -1.66
RTTNQ86VV8 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.69□□□□□ -1.66
RTTNQ86VV8 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RTTNQ86VV8 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.69□□□□□ -1.66
RTTNQ86VV8 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RTTNQ86VV8 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RTTNQ86VV8 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RTTNQ86VV8 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
RTTNQ86VV8 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RTTNQ86VV8 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RTTNQ86VV8 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RTTNQ86VV8 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
RTTNQ86VV8 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.68□□□□□ -1.66
RTTNQ86VV8 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RTTNQ86VV8 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
RTTNQ86VV8 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RTTNQ86VV8 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
RTTNQ86VV8 RNU11-201ENST00000387069 134 ntBASIC4.68□□□□□ -1.66
RTTNQ86VV8 CYCSP6-201ENST00000434498 302 ntBASIC4.68□□□□□ -1.66
RTTNQ86VV8 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.68□□□□□ -1.66
RTTNQ86VV8 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.68□□□□□ -1.66
RTTNQ86VV8 NUTF2P7-201ENST00000453086 375 ntBASIC4.68□□□□□ -1.66
RTTNQ86VV8 ATP5LP5-201ENST00000483050 299 ntBASIC4.68□□□□□ -1.66
RTTNQ86VV8 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.68□□□□□ -1.66
RTTNQ86VV8 NRBF2P4-201ENST00000520874 850 ntBASIC4.68□□□□□ -1.66
RTTNQ86VV8 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.68□□□□□ -1.66
RTTNQ86VV8 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.68□□□□□ -1.66
RTTNQ86VV8 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.68□□□□□ -1.66
RTTNQ86VV8 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
RTTNQ86VV8 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.68□□□□□ -1.66
RTTNQ86VV8 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.68□□□□□ -1.66
RTTNQ86VV8 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.68□□□□□ -1.66
RTTNQ86VV8 AC060766.1-201ENST00000590824 627 ntBASIC4.68□□□□□ -1.66
RTTNQ86VV8 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.68□□□□□ -1.66
RTTNQ86VV8 AL360012.1-201ENST00000602813 131 ntBASIC4.68□□□□□ -1.66
RTTNQ86VV8 AC010632.3-201ENST00000611377 369 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms