Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC6.26□□□□□ -1.41
ATG4DQ86TL0 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.26□□□□□ -1.41
ATG4DQ86TL0 AL354714.5-201ENST00000450131 590 ntBASIC6.26□□□□□ -1.41
ATG4DQ86TL0 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.26□□□□□ -1.41
ATG4DQ86TL0 OR6C5P-201ENST00000452388 923 ntBASIC6.26□□□□□ -1.41
ATG4DQ86TL0 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.26□□□□□ -1.41
ATG4DQ86TL0 RPSAP24-201ENST00000461543 873 ntBASIC6.26□□□□□ -1.41
ATG4DQ86TL0 AC026254.2-201ENST00000475295 371 ntBASIC6.26□□□□□ -1.41
ATG4DQ86TL0 AC091959.2-201ENST00000477363 321 ntBASIC6.26□□□□□ -1.41
ATG4DQ86TL0 VPS26AP1-201ENST00000483197 979 ntBASIC6.26□□□□□ -1.41
ATG4DQ86TL0 RPL12P7-201ENST00000493832 494 ntBASIC6.26□□□□□ -1.41
ATG4DQ86TL0 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.26□□□□□ -1.41
ATG4DQ86TL0 AC011352.2-201ENST00000514574 1016 ntBASIC6.26□□□□□ -1.41
ATG4DQ86TL0 RNU6-327P-201ENST00000516270 127 ntBASIC6.26□□□□□ -1.41
ATG4DQ86TL0 RNU6-358P-201ENST00000516564 75 ntBASIC6.26□□□□□ -1.41
ATG4DQ86TL0 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.26□□□□□ -1.41
ATG4DQ86TL0 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.26□□□□□ -1.41
ATG4DQ86TL0 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.26□□□□□ -1.41
ATG4DQ86TL0 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC6.26□□□□□ -1.41
ATG4DQ86TL0 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.26□□□□□ -1.41
ATG4DQ86TL0 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
ATG4DQ86TL0 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC6.26□□□□□ -1.41
ATG4DQ86TL0 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.26□□□□□ -1.41
ATG4DQ86TL0 AC026458.1-201ENST00000564330 438 ntBASIC6.26□□□□□ -1.41
ATG4DQ86TL0 AL391840.1-201ENST00000571144 367 ntBASIC6.26□□□□□ -1.41
ATG4DQ86TL0 MIR5708-201ENST00000579723 85 ntBASIC6.26□□□□□ -1.41
ATG4DQ86TL0 MIR4637-201ENST00000582405 84 ntBASIC6.26□□□□□ -1.41
ATG4DQ86TL0 AC011447.2-201ENST00000592921 283 ntBASIC6.26□□□□□ -1.41
ATG4DQ86TL0 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.26□□□□□ -1.41
ATG4DQ86TL0 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.26□□□□□ -1.41
ATG4DQ86TL0 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC6.26□□□□□ -1.41
ATG4DQ86TL0 AC091834.1-201ENST00000614543 472 ntBASIC6.26□□□□□ -1.41
ATG4DQ86TL0 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC6.26□□□□□ -1.41
ATG4DQ86TL0 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.26□□□□□ -1.41
ATG4DQ86TL0 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.26□□□□□ -1.41
ATG4DQ86TL0 AC022509.4-201ENST00000621404 572 ntBASIC6.26□□□□□ -1.41
ATG4DQ86TL0 AC120057.5-201ENST00000623840 154 ntBASIC6.26□□□□□ -1.41
ATG4DQ86TL0 AC008626.2-201ENST00000624425 248 ntBASIC6.26□□□□□ -1.41
ATG4DQ86TL0 AF001550.2-201ENST00000636643 217 ntBASIC6.26□□□□□ -1.41
ATG4DQ86TL0 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
ATG4DQ86TL0 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.26□□□□□ -1.41
ATG4DQ86TL0 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
ATG4DQ86TL0 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC6.26□□□□□ -1.41
ATG4DQ86TL0 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC6.26□□□□□ -1.41
ATG4DQ86TL0 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ATG4DQ86TL0 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ATG4DQ86TL0 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.26□□□□□ -1.41
ATG4DQ86TL0 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
ATG4DQ86TL0 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.26□□□□□ -1.41
ATG4DQ86TL0 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ATG4DQ86TL0 AC000367.1-201ENST00000452711 1766 ntBASIC6.26□□□□□ -1.41
ATG4DQ86TL0 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ATG4DQ86TL0 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.26□□□□□ -1.41
ATG4DQ86TL0 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ATG4DQ86TL0 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ATG4DQ86TL0 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ATG4DQ86TL0 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
ATG4DQ86TL0 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.25□□□□□ -1.41
ATG4DQ86TL0 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.25□□□□□ -1.41
ATG4DQ86TL0 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC6.25□□□□□ -1.41
ATG4DQ86TL0 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.25□□□□□ -1.41
ATG4DQ86TL0 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.25□□□□□ -1.41
ATG4DQ86TL0 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC6.25□□□□□ -1.41
ATG4DQ86TL0 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
ATG4DQ86TL0 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
ATG4DQ86TL0 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
ATG4DQ86TL0 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
ATG4DQ86TL0 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
ATG4DQ86TL0 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
ATG4DQ86TL0 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
ATG4DQ86TL0 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
ATG4DQ86TL0 Y_RNA.160-201ENST00000363677 92 ntBASIC6.25□□□□□ -1.41
ATG4DQ86TL0 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.25□□□□□ -1.41
ATG4DQ86TL0 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.25□□□□□ -1.41
ATG4DQ86TL0 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
ATG4DQ86TL0 Y_RNA.529-201ENST00000384586 119 ntBASIC6.25□□□□□ -1.41
ATG4DQ86TL0 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
ATG4DQ86TL0 TAF9BP1-201ENST00000396646 746 ntBASIC6.25□□□□□ -1.41
ATG4DQ86TL0 MIR541-201ENST00000401360 84 ntBASIC6.25□□□□□ -1.41
ATG4DQ86TL0 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
ATG4DQ86TL0 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
ATG4DQ86TL0 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.25□□□□□ -1.41
ATG4DQ86TL0 RNA5SP280-201ENST00000411230 115 ntBASIC6.25□□□□□ -1.41
ATG4DQ86TL0 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.25□□□□□ -1.41
ATG4DQ86TL0 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.25□□□□□ -1.41
ATG4DQ86TL0 TAF13P2-201ENST00000416876 286 ntBASIC6.25□□□□□ -1.41
ATG4DQ86TL0 RPL21P111-201ENST00000418453 477 ntBASIC6.25□□□□□ -1.41
ATG4DQ86TL0 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC6.25□□□□□ -1.41
ATG4DQ86TL0 SDCBPP3-201ENST00000419629 891 ntBASIC6.25□□□□□ -1.41
ATG4DQ86TL0 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.25□□□□□ -1.41
ATG4DQ86TL0 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.25□□□□□ -1.41
ATG4DQ86TL0 AC005534.2-201ENST00000431047 433 ntBASIC6.25□□□□□ -1.41
ATG4DQ86TL0 TMX2P1-201ENST00000436507 708 ntBASIC6.25□□□□□ -1.41
ATG4DQ86TL0 EMC3-AS1-205ENST00000438698 534 ntBASIC6.25□□□□□ -1.41
ATG4DQ86TL0 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.25□□□□□ -1.41
ATG4DQ86TL0 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.25□□□□□ -1.41
ATG4DQ86TL0 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
ATG4DQ86TL0 BMS1P10-201ENST00000443754 1120 ntBASIC6.25□□□□□ -1.41
ATG4DQ86TL0 AL592437.1-201ENST00000443781 492 ntBASIC6.25□□□□□ -1.41
ATG4DQ86TL0 TRIM60P16-201ENST00000444048 694 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms