Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 AC068020.1-201ENST00000594215 661 ntBASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 AC027243.2-201ENST00000602530 724 ntBASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 AC130352.1-201ENST00000602979 661 ntBASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 AP004372.1-201ENST00000604842 844 ntBASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 HIRAP1-201ENST00000605318 787 ntBASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 AC015712.7-201ENST00000615211 635 ntBASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 AC005618.4-201ENST00000625053 554 ntBASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 AC087565.3-203ENST00000641018 837 ntBASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 AC079776.5-201ENST00000641920 211 ntBASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 AL163152.1-201ENST00000642001 374 ntBASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 AL031595.2-201ENST00000624215 19071 ntBASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 AL078621.3-201ENST00000623707 2042 ntBASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 AL360270.2-201ENST00000562952 5985 ntBASIC5.27□□□□□ -1.56
NUP54Q7Z3B4 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 MAPK10-338ENST00000641647 3362 ntBASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 RNU4-44P-201ENST00000363050 141 ntBASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 OR1F12-201ENST00000402365 945 ntBASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 AL590806.1-201ENST00000415818 853 ntBASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 MTND6P12-201ENST00000428247 522 ntBASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 RPS29P14-201ENST00000431518 171 ntBASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 AC083899.1-201ENST00000454465 3819 ntBASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 SNORD125-201ENST00000459538 96 ntBASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 RPSAP37-201ENST00000470913 821 ntBASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 RPL12P24-201ENST00000474907 486 ntBASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 AC073610.1-201ENST00000489971 396 ntBASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 COL6A4P2-205ENST00000509855 506 ntBASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 MTCYBP19-201ENST00000517463 1124 ntBASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 OR8Q1P-201ENST00000526467 655 ntBASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 AC084824.2-201ENST00000548906 345 ntBASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 AGGF1P7-201ENST00000562369 913 ntBASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 AC015802.2-201ENST00000589690 189 ntBASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 AC063977.5-201ENST00000601044 974 ntBASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 AC002069.2-201ENST00000603580 883 ntBASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 AP005431.1-201ENST00000618479 319 ntBASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 AC127024.6-201ENST00000621598 424 ntBASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 PHKBP1-201ENST00000450951 1951 ntBASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NUP54Q7Z3B4 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 AP000756.2-201ENST00000624168 2567 ntBASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 HSPA8P14-201ENST00000552265 1805 ntBASIC5.26□□□□□ -1.57
NUP54Q7Z3B4 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms