Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC58Q4VC31 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC58Q4VC31 AL606537.1-201ENST00000607258 2011 ntBASIC4.73□□□□□ -1.65
CCDC58Q4VC31 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC58Q4VC31 MRE11P1-201ENST00000464884 2127 ntBASIC4.73□□□□□ -1.65
CCDC58Q4VC31 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC58Q4VC31 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC58Q4VC31 AC007382.1-201ENST00000624376 2618 ntBASIC4.73□□□□□ -1.65
CCDC58Q4VC31 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC58Q4VC31 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC58Q4VC31 RNU1-94P-201ENST00000362627 173 ntBASIC4.73□□□□□ -1.65
CCDC58Q4VC31 RNA5SP477-201ENST00000362639 119 ntBASIC4.73□□□□□ -1.65
CCDC58Q4VC31 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC58Q4VC31 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC58Q4VC31 E2F6P2-201ENST00000420708 748 ntBASIC4.73□□□□□ -1.65
CCDC58Q4VC31 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC58Q4VC31 GAPDHP58-201ENST00000438477 1006 ntBASIC4.73□□□□□ -1.65
CCDC58Q4VC31 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC58Q4VC31 AC093166.3-201ENST00000448785 303 ntBASIC4.73□□□□□ -1.65
CCDC58Q4VC31 AC079168.1-201ENST00000458741 345 ntBASIC4.73□□□□□ -1.65
CCDC58Q4VC31 RPL5P16-201ENST00000471467 790 ntBASIC4.73□□□□□ -1.65
CCDC58Q4VC31 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC58Q4VC31 RN7SL814P-201ENST00000487715 300 ntBASIC4.73□□□□□ -1.65
CCDC58Q4VC31 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC58Q4VC31 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC58Q4VC31 AC011411.1-201ENST00000509592 876 ntBASIC4.73□□□□□ -1.65
CCDC58Q4VC31 RNU6-615P-201ENST00000516065 106 ntBASIC4.73□□□□□ -1.65
CCDC58Q4VC31 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC4.73□□□□□ -1.65
CCDC58Q4VC31 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC58Q4VC31 AC079905.1-201ENST00000549280 475 ntBASIC4.73□□□□□ -1.65
CCDC58Q4VC31 AL845552.1-201ENST00000556820 323 ntBASIC4.73□□□□□ -1.65
CCDC58Q4VC31 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC58Q4VC31 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC58Q4VC31 AC002310.3-201ENST00000569728 723 ntBASIC4.73□□□□□ -1.65
CCDC58Q4VC31 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC58Q4VC31 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC58Q4VC31 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC58Q4VC31 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC58Q4VC31 AP000648.2-201ENST00000624182 404 ntBASIC4.73□□□□□ -1.65
CCDC58Q4VC31 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC58Q4VC31 AC008691.1-209ENST00000642094 814 ntBASIC4.73□□□□□ -1.65
CCDC58Q4VC31 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC58Q4VC31 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC58Q4VC31 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC58Q4VC31 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC58Q4VC31 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
CCDC58Q4VC31 AC023421.1-201ENST00000590535 1785 ntBASIC4.73□□□□□ -1.65
CCDC58Q4VC31 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC58Q4VC31 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC58Q4VC31 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC58Q4VC31 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC58Q4VC31 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC58Q4VC31 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC58Q4VC31 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC58Q4VC31 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC58Q4VC31 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC58Q4VC31 AL138820.1-201ENST00000617901 5305 ntBASIC4.72□□□□□ -1.65
CCDC58Q4VC31 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC58Q4VC31 RPS3AP2-201ENST00000407190 754 ntBASIC4.72□□□□□ -1.65
CCDC58Q4VC31 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC58Q4VC31 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC58Q4VC31 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC58Q4VC31 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC58Q4VC31 TRGV5P-201ENST00000419915 354 ntBASIC4.72□□□□□ -1.65
CCDC58Q4VC31 OR5M12P-201ENST00000423388 929 ntBASIC4.72□□□□□ -1.65
CCDC58Q4VC31 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC58Q4VC31 AL512637.1-201ENST00000439523 1231 ntBASIC4.72□□□□□ -1.65
CCDC58Q4VC31 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.72□□□□□ -1.65
CCDC58Q4VC31 AL450996.1-201ENST00000445574 1202 ntBASIC4.72□□□□□ -1.65
CCDC58Q4VC31 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC58Q4VC31 BX842559.2-201ENST00000451418 605 ntBASIC4.72□□□□□ -1.65
CCDC58Q4VC31 VDAC2P4-201ENST00000452925 711 ntBASIC4.72□□□□□ -1.65
CCDC58Q4VC31 RPS23P6-201ENST00000466136 431 ntBASIC4.72□□□□□ -1.65
CCDC58Q4VC31 AC093827.1-201ENST00000480094 861 ntBASIC4.72□□□□□ -1.65
CCDC58Q4VC31 AC021006.1-201ENST00000489849 553 ntBASIC4.72□□□□□ -1.65
CCDC58Q4VC31 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC58Q4VC31 HMGB3P16-201ENST00000508037 287 ntBASIC4.72□□□□□ -1.65
CCDC58Q4VC31 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC58Q4VC31 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC58Q4VC31 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC58Q4VC31 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.72□□□□□ -1.65
CCDC58Q4VC31 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC58Q4VC31 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC58Q4VC31 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC58Q4VC31 PPATP2-201ENST00000605635 508 ntBASIC4.72□□□□□ -1.65
CCDC58Q4VC31 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC4.72□□□□□ -1.65
CCDC58Q4VC31 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.72□□□□□ -1.65
CCDC58Q4VC31 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CCDC58Q4VC31 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC58Q4VC31 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
CCDC58Q4VC31 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC58Q4VC31 EEF1A1P21-201ENST00000512363 1344 ntBASIC4.72□□□□□ -1.65
CCDC58Q4VC31 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
CCDC58Q4VC31 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.71□□□□□ -1.66
CCDC58Q4VC31 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms