Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 AC083899.1-201ENST00000454465 3819 ntBASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 AC004076.2-201ENST00000620532 3323 ntBASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 AC140134.1-201ENST00000511830 3544 ntBASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 RN7SKP103-201ENST00000363848 320 ntBASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 AC007068.1-201ENST00000396690 844 ntBASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 RPS4XP16-201ENST00000427198 791 ntBASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 FABP7P2-201ENST00000429946 379 ntBASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 NDUFB4P8-201ENST00000435351 367 ntBASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 RN7SL188P-201ENST00000469842 285 ntBASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 AC093827.1-201ENST00000480094 861 ntBASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 AC083982.1-201ENST00000485679 344 ntBASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 AC007066.2-202ENST00000566531 914 ntBASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 AC015712.7-201ENST00000615211 635 ntBASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 CASC19-221ENST00000641309 1382 ntBASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 NLRP3P1-201ENST00000622303 1785 ntBASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.16□□□□□ -1.42
SHROOM1Q2M3G4 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SHROOM1Q2M3G4 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SHROOM1Q2M3G4 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SHROOM1Q2M3G4 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.15□□□□□ -1.42
SHROOM1Q2M3G4 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
SHROOM1Q2M3G4 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SHROOM1Q2M3G4 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SHROOM1Q2M3G4 RNA5SP443-201ENST00000363083 132 ntBASIC6.15□□□□□ -1.42
SHROOM1Q2M3G4 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SHROOM1Q2M3G4 U3.28-201ENST00000391249 210 ntBASIC6.15□□□□□ -1.42
SHROOM1Q2M3G4 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.15□□□□□ -1.42
SHROOM1Q2M3G4 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SHROOM1Q2M3G4 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC6.15□□□□□ -1.42
SHROOM1Q2M3G4 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.15□□□□□ -1.42
SHROOM1Q2M3G4 NOP56P2-201ENST00000447491 769 ntBASIC6.15□□□□□ -1.42
SHROOM1Q2M3G4 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.15□□□□□ -1.42
SHROOM1Q2M3G4 AP000797.2-201ENST00000475768 606 ntBASIC6.15□□□□□ -1.42
SHROOM1Q2M3G4 GTF2F2P1-201ENST00000511083 675 ntBASIC6.15□□□□□ -1.42
SHROOM1Q2M3G4 RN7SKP248-201ENST00000516278 305 ntBASIC6.15□□□□□ -1.42
SHROOM1Q2M3G4 AC005000.1-201ENST00000536192 288 ntBASIC6.15□□□□□ -1.42
SHROOM1Q2M3G4 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.15□□□□□ -1.42
SHROOM1Q2M3G4 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.15□□□□□ -1.42
SHROOM1Q2M3G4 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.15□□□□□ -1.42
SHROOM1Q2M3G4 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.15□□□□□ -1.42
SHROOM1Q2M3G4 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC6.15□□□□□ -1.42
SHROOM1Q2M3G4 AC008814.1-201ENST00000603797 406 ntBASIC6.15□□□□□ -1.42
SHROOM1Q2M3G4 AC009027.1-201ENST00000604510 479 ntBASIC6.15□□□□□ -1.42
SHROOM1Q2M3G4 AC009597.2-201ENST00000604659 592 ntBASIC6.15□□□□□ -1.42
SHROOM1Q2M3G4 uc_338.18-201ENST00000615451 175 ntBASIC6.15□□□□□ -1.42
SHROOM1Q2M3G4 AP003400.3-201ENST00000624904 346 ntBASIC6.15□□□□□ -1.42
SHROOM1Q2M3G4 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
SHROOM1Q2M3G4 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.15□□□□□ -1.43
SHROOM1Q2M3G4 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SHROOM1Q2M3G4 AC079097.1-201ENST00000512187 1399 ntBASIC6.15□□□□□ -1.43
SHROOM1Q2M3G4 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.15□□□□□ -1.43
SHROOM1Q2M3G4 AC092111.2-201ENST00000611627 1414 ntBASIC6.15□□□□□ -1.43
SHROOM1Q2M3G4 AC093671.1-201ENST00000624981 2929 ntBASIC6.15□□□□□ -1.43
SHROOM1Q2M3G4 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
SHROOM1Q2M3G4 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SHROOM1Q2M3G4 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms