Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.99□□□□□ -1.29
SOX4Q06945 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
SOX4Q06945 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.99□□□□□ -1.29
SOX4Q06945 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC6.99□□□□□ -1.29
SOX4Q06945 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.99□□□□□ -1.29
SOX4Q06945 AC078795.3-201ENST00000602913 472 ntBASIC6.99□□□□□ -1.29
SOX4Q06945 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.99□□□□□ -1.29
SOX4Q06945 AC063943.3-201ENST00000615562 356 ntBASIC6.99□□□□□ -1.29
SOX4Q06945 AP001264.1-201ENST00000620602 703 ntBASIC6.99□□□□□ -1.29
SOX4Q06945 AL132796.3-201ENST00000624703 900 ntBASIC6.99□□□□□ -1.29
SOX4Q06945 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC6.99□□□□□ -1.29
SOX4Q06945 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.99□□□□□ -1.29
SOX4Q06945 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.99□□□□□ -1.29
SOX4Q06945 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.99□□□□□ -1.29
SOX4Q06945 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
SOX4Q06945 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SOX4Q06945 SPATA31C1-201ENST00000420021 3895 ntBASIC6.99□□□□□ -1.29
SOX4Q06945 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.99□□□□□ -1.29
SOX4Q06945 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
SOX4Q06945 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
SOX4Q06945 TTC39DP-201ENST00000416781 1688 ntBASIC6.99□□□□□ -1.29
SOX4Q06945 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
SOX4Q06945 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SOX4Q06945 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SOX4Q06945 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SOX4Q06945 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SOX4Q06945 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SOX4Q06945 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.99□□□□□ -1.29
SOX4Q06945 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC6.99□□□□□ -1.29
SOX4Q06945 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SOX4Q06945 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SOX4Q06945 AC092111.1-201ENST00000618256 3358 ntBASIC6.99□□□□□ -1.29
SOX4Q06945 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.98□□□□□ -1.29
SOX4Q06945 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC6.98□□□□□ -1.29
SOX4Q06945 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SOX4Q06945 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC6.98□□□□□ -1.29
SOX4Q06945 NEPNP-201ENST00000404786 1371 ntBASIC6.98□□□□□ -1.29
SOX4Q06945 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.98□□□□□ -1.29
SOX4Q06945 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SOX4Q06945 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
SOX4Q06945 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
SOX4Q06945 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.98□□□□□ -1.29
SOX4Q06945 RNU6-1011P-201ENST00000384668 107 ntBASIC6.98□□□□□ -1.29
SOX4Q06945 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
SOX4Q06945 RN7SKP281-201ENST00000410472 352 ntBASIC6.98□□□□□ -1.29
SOX4Q06945 TPMTP3-201ENST00000411928 735 ntBASIC6.98□□□□□ -1.29
SOX4Q06945 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.98□□□□□ -1.29
SOX4Q06945 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.98□□□□□ -1.29
SOX4Q06945 RPL21P43-201ENST00000425440 472 ntBASIC6.98□□□□□ -1.29
SOX4Q06945 Z68868.1-201ENST00000429048 544 ntBASIC6.98□□□□□ -1.29
SOX4Q06945 CDY14P-201ENST00000431260 1014 ntBASIC6.98□□□□□ -1.29
SOX4Q06945 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC6.98□□□□□ -1.29
SOX4Q06945 CEACAMP5-201ENST00000448037 961 ntBASIC6.98□□□□□ -1.29
SOX4Q06945 MTND5P20-201ENST00000448677 143 ntBASIC6.98□□□□□ -1.29
SOX4Q06945 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.98□□□□□ -1.29
SOX4Q06945 CDY23P-201ENST00000451661 1014 ntBASIC6.98□□□□□ -1.29
SOX4Q06945 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC6.98□□□□□ -1.29
SOX4Q06945 RN7SL552P-201ENST00000462094 276 ntBASIC6.98□□□□□ -1.29
SOX4Q06945 AC116337.2-201ENST00000477662 156 ntBASIC6.98□□□□□ -1.29
SOX4Q06945 AC004924.1-201ENST00000480160 781 ntBASIC6.98□□□□□ -1.29
SOX4Q06945 RPL12P7-201ENST00000493832 494 ntBASIC6.98□□□□□ -1.29
SOX4Q06945 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC6.98□□□□□ -1.29
SOX4Q06945 AC131392.1-201ENST00000506490 633 ntBASIC6.98□□□□□ -1.29
SOX4Q06945 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC6.98□□□□□ -1.29
SOX4Q06945 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.98□□□□□ -1.29
SOX4Q06945 RNA5SP441-201ENST00000516809 88 ntBASIC6.98□□□□□ -1.29
SOX4Q06945 snoZ278.1-201ENST00000517059 112 ntBASIC6.98□□□□□ -1.29
SOX4Q06945 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.98□□□□□ -1.29
SOX4Q06945 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC6.98□□□□□ -1.29
SOX4Q06945 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
SOX4Q06945 TPRKBP2-201ENST00000565969 475 ntBASIC6.98□□□□□ -1.29
SOX4Q06945 MIR3154-201ENST00000577829 84 ntBASIC6.98□□□□□ -1.29
SOX4Q06945 RN7SL230P-201ENST00000580835 303 ntBASIC6.98□□□□□ -1.29
SOX4Q06945 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.98□□□□□ -1.29
SOX4Q06945 AC018714.1-201ENST00000605028 208 ntBASIC6.98□□□□□ -1.29
SOX4Q06945 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.98□□□□□ -1.29
SOX4Q06945 AC007497.1-201ENST00000610421 561 ntBASIC6.98□□□□□ -1.29
SOX4Q06945 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.98□□□□□ -1.29
SOX4Q06945 AC090970.3-201ENST00000612566 866 ntBASIC6.98□□□□□ -1.29
SOX4Q06945 AC090517.2-201ENST00000614966 680 ntBASIC6.98□□□□□ -1.29
SOX4Q06945 uc_338.31-201ENST00000615595 186 ntBASIC6.98□□□□□ -1.29
SOX4Q06945 MIR6085-201ENST00000618314 110 ntBASIC6.98□□□□□ -1.29
SOX4Q06945 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SOX4Q06945 AL356321.1-201ENST00000621360 228 ntBASIC6.98□□□□□ -1.29
SOX4Q06945 MRPL57P1-201ENST00000621486 265 ntBASIC6.98□□□□□ -1.29
SOX4Q06945 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SOX4Q06945 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SOX4Q06945 UGT2B24P-201ENST00000514441 1597 ntBASIC6.98□□□□□ -1.29
SOX4Q06945 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.98□□□□□ -1.29
SOX4Q06945 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SOX4Q06945 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
SOX4Q06945 EIF3EP1-201ENST00000433978 1316 ntBASIC6.98□□□□□ -1.29
SOX4Q06945 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.98□□□□□ -1.29
SOX4Q06945 AC009120.2-204ENST00000621548 2032 ntBASIC6.98□□□□□ -1.29
SOX4Q06945 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.98□□□□□ -1.29
SOX4Q06945 AC009831.5-201ENST00000624000 3189 ntBASIC6.98□□□□□ -1.29
SOX4Q06945 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SOX4Q06945 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SOX4Q06945 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SOX4Q06945 SMG1P5-202ENST00000529428 4219 ntBASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms