Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CLDN12P56749 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CLDN12P56749 AC004386.1-201ENST00000393214 761 ntBASIC4.52□□□□□ -1.69
CLDN12P56749 HSPA8P15-201ENST00000401676 786 ntBASIC4.52□□□□□ -1.69
CLDN12P56749 RPL10P10-201ENST00000403509 664 ntBASIC4.52□□□□□ -1.69
CLDN12P56749 AL035079.1-201ENST00000405210 287 ntBASIC4.52□□□□□ -1.69
CLDN12P56749 OR4K12P-201ENST00000406538 961 ntBASIC4.52□□□□□ -1.69
CLDN12P56749 GAPDHP42-201ENST00000406848 981 ntBASIC4.52□□□□□ -1.69
CLDN12P56749 U3.32-201ENST00000408116 212 ntBASIC4.52□□□□□ -1.69
CLDN12P56749 RNA5SP487-201ENST00000410186 122 ntBASIC4.52□□□□□ -1.69
CLDN12P56749 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC4.52□□□□□ -1.69
CLDN12P56749 AC007738.1-201ENST00000413892 348 ntBASIC4.52□□□□□ -1.69
CLDN12P56749 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN12P56749 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.52□□□□□ -1.69
CLDN12P56749 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.52□□□□□ -1.69
CLDN12P56749 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN12P56749 AC093166.3-201ENST00000448785 303 ntBASIC4.52□□□□□ -1.69
CLDN12P56749 AP006222.1-205ENST00000450734 457 ntBASIC4.52□□□□□ -1.69
CLDN12P56749 RNA5SP103-201ENST00000459503 118 ntBASIC4.52□□□□□ -1.69
CLDN12P56749 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.52□□□□□ -1.69
CLDN12P56749 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN12P56749 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN12P56749 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CLDN12P56749 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN12P56749 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.52□□□□□ -1.69
CLDN12P56749 RBM22P12-201ENST00000567098 1255 ntBASIC4.52□□□□□ -1.69
CLDN12P56749 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN12P56749 AC005341.1-201ENST00000571086 708 ntBASIC4.52□□□□□ -1.69
CLDN12P56749 MIR744-201ENST00000578242 98 ntBASIC4.52□□□□□ -1.69
CLDN12P56749 MIR5010-201ENST00000582846 120 ntBASIC4.52□□□□□ -1.69
CLDN12P56749 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.52□□□□□ -1.69
CLDN12P56749 AC009597.2-201ENST00000604659 592 ntBASIC4.52□□□□□ -1.69
CLDN12P56749 AC025262.3-201ENST00000623666 360 ntBASIC4.52□□□□□ -1.69
CLDN12P56749 AL683826.1-201ENST00000624104 627 ntBASIC4.52□□□□□ -1.69
CLDN12P56749 AP001962.1-201ENST00000624114 559 ntBASIC4.52□□□□□ -1.69
CLDN12P56749 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN12P56749 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.52□□□□□ -1.69
CLDN12P56749 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN12P56749 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN12P56749 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CLDN12P56749 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.52□□□□□ -1.69
CLDN12P56749 AC006210.2-201ENST00000367074 1545 ntBASIC4.51□□□□□ -1.69
CLDN12P56749 AC090181.3-201ENST00000624777 1514 ntBASIC4.51□□□□□ -1.69
CLDN12P56749 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN12P56749 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN12P56749 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN12P56749 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.51□□□□□ -1.69
CLDN12P56749 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.51□□□□□ -1.69
CLDN12P56749 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN12P56749 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN12P56749 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
CLDN12P56749 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN12P56749 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN12P56749 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.51□□□□□ -1.69
CLDN12P56749 OR55B1P-203ENST00000641518 2602 ntBASIC4.51□□□□□ -1.69
CLDN12P56749 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CLDN12P56749 AL672167.1-205ENST00000641112 3080 ntBASIC4.51□□□□□ -1.69
CLDN12P56749 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CLDN12P56749 AC107021.2-201ENST00000567714 2095 ntBASIC4.51□□□□□ -1.69
CLDN12P56749 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN12P56749 OR56A4-201ENST00000330728 1209 ntBASIC4.51□□□□□ -1.69
CLDN12P56749 AC005294.1-201ENST00000355509 281 ntBASIC4.51□□□□□ -1.69
CLDN12P56749 RNU1-146P-201ENST00000364015 165 ntBASIC4.51□□□□□ -1.69
CLDN12P56749 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.51□□□□□ -1.69
CLDN12P56749 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.51□□□□□ -1.69
CLDN12P56749 AL078599.1-201ENST00000402075 293 ntBASIC4.51□□□□□ -1.69
CLDN12P56749 AC013429.2-201ENST00000418798 781 ntBASIC4.51□□□□□ -1.69
CLDN12P56749 NPM1P22-201ENST00000427761 952 ntBASIC4.51□□□□□ -1.69
CLDN12P56749 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.51□□□□□ -1.69
CLDN12P56749 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.51□□□□□ -1.69
CLDN12P56749 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.51□□□□□ -1.69
CLDN12P56749 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.51□□□□□ -1.69
CLDN12P56749 AC104634.1-201ENST00000452720 462 ntBASIC4.51□□□□□ -1.69
CLDN12P56749 DNAJB5P1-201ENST00000454004 806 ntBASIC4.51□□□□□ -1.69
CLDN12P56749 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.51□□□□□ -1.69
CLDN12P56749 HLA-DPA3-207ENST00000454398 229 ntBASIC4.51□□□□□ -1.69
CLDN12P56749 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
CLDN12P56749 AC098583.1-201ENST00000480875 255 ntBASIC4.51□□□□□ -1.69
CLDN12P56749 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.51□□□□□ -1.69
CLDN12P56749 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.51□□□□□ -1.69
CLDN12P56749 HMGB1P44-201ENST00000508597 572 ntBASIC4.51□□□□□ -1.69
CLDN12P56749 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.51□□□□□ -1.69
CLDN12P56749 AC105031.1-201ENST00000518550 476 ntBASIC4.51□□□□□ -1.69
CLDN12P56749 OR10D4P-201ENST00000525892 951 ntBASIC4.51□□□□□ -1.69
CLDN12P56749 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.51□□□□□ -1.69
CLDN12P56749 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.51□□□□□ -1.69
CLDN12P56749 IGBP1P1-201ENST00000554337 1009 ntBASIC4.51□□□□□ -1.69
CLDN12P56749 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.51□□□□□ -1.69
CLDN12P56749 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.51□□□□□ -1.69
CLDN12P56749 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.51□□□□□ -1.69
CLDN12P56749 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CLDN12P56749 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.51□□□□□ -1.69
CLDN12P56749 AC108359.1-201ENST00000616451 1211 ntBASIC4.51□□□□□ -1.69
CLDN12P56749 AC129778.1-202ENST00000623812 261 ntBASIC4.51□□□□□ -1.69
CLDN12P56749 AP001052.1-201ENST00000626421 99 ntBASIC4.51□□□□□ -1.69
CLDN12P56749 AL591379.1-207ENST00000635982 261 ntBASIC4.51□□□□□ -1.69
CLDN12P56749 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.51□□□□□ -1.69
CLDN12P56749 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CLDN12P56749 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN12P56749 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms