Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 AP003033.2-201ENST00000528901 805 ntBASIC4.51□□□□□ -1.69
PAX9P55771 AC068339.2-201ENST00000534395 618 ntBASIC4.51□□□□□ -1.69
PAX9P55771 UBTFL9-201ENST00000534504 1148 ntBASIC4.51□□□□□ -1.69
PAX9P55771 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.51□□□□□ -1.69
PAX9P55771 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.51□□□□□ -1.69
PAX9P55771 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.51□□□□□ -1.69
PAX9P55771 NMNAT1P5-201ENST00000559657 841 ntBASIC4.51□□□□□ -1.69
PAX9P55771 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC4.51□□□□□ -1.69
PAX9P55771 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC4.51□□□□□ -1.69
PAX9P55771 AC104072.1-201ENST00000568817 668 ntBASIC4.51□□□□□ -1.69
PAX9P55771 AC126365.2-201ENST00000580630 379 ntBASIC4.51□□□□□ -1.69
PAX9P55771 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PAX9P55771 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.51□□□□□ -1.69
PAX9P55771 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PAX9P55771 AC011500.1-201ENST00000601963 469 ntBASIC4.51□□□□□ -1.69
PAX9P55771 AC133794.1-201ENST00000602731 914 ntBASIC4.51□□□□□ -1.69
PAX9P55771 FAM72A-208ENST00000607379 1139 ntBASIC4.51□□□□□ -1.69
PAX9P55771 AC018645.2-201ENST00000609151 472 ntBASIC4.51□□□□□ -1.69
PAX9P55771 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC4.51□□□□□ -1.69
PAX9P55771 AC016957.2-201ENST00000616998 848 ntBASIC4.51□□□□□ -1.69
PAX9P55771 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PAX9P55771 AL136228.1-201ENST00000622221 319 ntBASIC4.51□□□□□ -1.69
PAX9P55771 AC006840.1-201ENST00000623069 542 ntBASIC4.51□□□□□ -1.69
PAX9P55771 AC090617.9-201ENST00000623751 147 ntBASIC4.51□□□□□ -1.69
PAX9P55771 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.51□□□□□ -1.69
PAX9P55771 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PAX9P55771 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PAX9P55771 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
PAX9P55771 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.51□□□□□ -1.69
PAX9P55771 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PAX9P55771 MTND5P23-201ENST00000430812 1655 ntBASIC4.51□□□□□ -1.69
PAX9P55771 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
PAX9P55771 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PAX9P55771 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
PAX9P55771 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PAX9P55771 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.5□□□□□ -1.69
PAX9P55771 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.5□□□□□ -1.69
PAX9P55771 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PAX9P55771 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PAX9P55771 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PAX9P55771 MTND4P9-201ENST00000507819 1346 ntBASIC4.5□□□□□ -1.69
PAX9P55771 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
PAX9P55771 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PAX9P55771 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.5□□□□□ -1.69
PAX9P55771 AL359715.4-201ENST00000606629 1436 ntBASIC4.5□□□□□ -1.69
PAX9P55771 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4.5□□□□□ -1.69
PAX9P55771 RNFT1P3-201ENST00000340898 1052 ntBASIC4.5□□□□□ -1.69
PAX9P55771 TINAG-203ENST00000370869 782 ntTSL 3 BASIC4.5□□□□□ -1.69
PAX9P55771 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.5□□□□□ -1.69
PAX9P55771 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC4.5□□□□□ -1.69
PAX9P55771 AL121878.1-201ENST00000418638 859 ntBASIC4.5□□□□□ -1.69
PAX9P55771 MTCYBP7-201ENST00000419540 1134 ntBASIC4.5□□□□□ -1.69
PAX9P55771 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.5□□□□□ -1.69
PAX9P55771 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.5□□□□□ -1.69
PAX9P55771 FAM183DP-201ENST00000421987 399 ntBASIC4.5□□□□□ -1.69
PAX9P55771 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PAX9P55771 HSPD1P12-201ENST00000429127 1069 ntBASIC4.5□□□□□ -1.69
PAX9P55771 RPL7P56-201ENST00000429441 717 ntBASIC4.5□□□□□ -1.69
PAX9P55771 RPL7AP49-201ENST00000429522 581 ntBASIC4.5□□□□□ -1.69
PAX9P55771 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.5□□□□□ -1.69
PAX9P55771 AL591438.1-201ENST00000433508 581 ntBASIC4.5□□□□□ -1.69
PAX9P55771 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.5□□□□□ -1.69
PAX9P55771 AL353662.1-201ENST00000439099 327 ntBASIC4.5□□□□□ -1.69
PAX9P55771 RNFT1P2-201ENST00000443064 757 ntBASIC4.5□□□□□ -1.69
PAX9P55771 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PAX9P55771 AC010240.2-201ENST00000445363 1205 ntBASIC4.5□□□□□ -1.69
PAX9P55771 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.5□□□□□ -1.69
PAX9P55771 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PAX9P55771 AC093166.4-201ENST00000457867 318 ntBASIC4.5□□□□□ -1.69
PAX9P55771 RN7SL254P-201ENST00000460609 284 ntBASIC4.5□□□□□ -1.69
PAX9P55771 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC4.5□□□□□ -1.69
PAX9P55771 AC098818.1-201ENST00000478593 252 ntBASIC4.5□□□□□ -1.69
PAX9P55771 AC098583.1-201ENST00000480875 255 ntBASIC4.5□□□□□ -1.69
PAX9P55771 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.5□□□□□ -1.69
PAX9P55771 HMGN1P17-201ENST00000513734 295 ntBASIC4.5□□□□□ -1.69
PAX9P55771 RNU6-334P-201ENST00000517072 102 ntBASIC4.5□□□□□ -1.69
PAX9P55771 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.5□□□□□ -1.69
PAX9P55771 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC4.5□□□□□ -1.69
PAX9P55771 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
PAX9P55771 MTND1P6-201ENST00000523621 946 ntBASIC4.5□□□□□ -1.69
PAX9P55771 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.5□□□□□ -1.69
PAX9P55771 IGLV3-30-201ENST00000524362 298 ntBASIC4.5□□□□□ -1.69
PAX9P55771 PMS2P3-207ENST00000529061 717 ntBASIC4.5□□□□□ -1.69
PAX9P55771 OR4A41P-201ENST00000533053 928 ntBASIC4.5□□□□□ -1.69
PAX9P55771 AC027369.5-201ENST00000533838 755 ntBASIC4.5□□□□□ -1.69
PAX9P55771 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.5□□□□□ -1.69
PAX9P55771 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PAX9P55771 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.5□□□□□ -1.69
PAX9P55771 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.5□□□□□ -1.69
PAX9P55771 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC4.5□□□□□ -1.69
PAX9P55771 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PAX9P55771 AC121758.1-202ENST00000556917 658 ntBASIC4.5□□□□□ -1.69
PAX9P55771 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.5□□□□□ -1.69
PAX9P55771 AC040958.1-201ENST00000561102 201 ntBASIC4.5□□□□□ -1.69
PAX9P55771 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.5□□□□□ -1.69
PAX9P55771 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PAX9P55771 AC002519.2-203ENST00000567043 837 ntBASIC4.5□□□□□ -1.69
PAX9P55771 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.5□□□□□ -1.69
PAX9P55771 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.5□□□□□ -1.69
PAX9P55771 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms