Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
CDH12P55289 AC008507.3-201ENST00000585753 472 ntBASIC5.26□□□□□ -1.57
CDH12P55289 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH12P55289 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH12P55289 CLIC4P2-201ENST00000601934 717 ntBASIC5.26□□□□□ -1.57
CDH12P55289 AC079880.2-201ENST00000603790 1213 ntBASIC5.26□□□□□ -1.57
CDH12P55289 MIR6793-201ENST00000612376 63 ntBASIC5.26□□□□□ -1.57
CDH12P55289 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDH12P55289 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH12P55289 AC084824.4-201ENST00000620106 731 ntBASIC5.26□□□□□ -1.57
CDH12P55289 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.26□□□□□ -1.57
CDH12P55289 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH12P55289 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH12P55289 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.26□□□□□ -1.57
CDH12P55289 OR4F13P-202ENST00000560066 2054 ntBASIC5.26□□□□□ -1.57
CDH12P55289 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDH12P55289 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDH12P55289 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH12P55289 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH12P55289 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
CDH12P55289 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CDH12P55289 AC068870.1-201ENST00000563737 2455 ntBASIC5.25□□□□□ -1.57
CDH12P55289 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH12P55289 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CDH12P55289 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH12P55289 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH12P55289 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH12P55289 AL359715.4-201ENST00000606629 1436 ntBASIC5.25□□□□□ -1.57
CDH12P55289 LYARP1-201ENST00000436977 1501 ntBASIC5.25□□□□□ -1.57
CDH12P55289 AC092681.1-201ENST00000297369 291 ntBASIC5.25□□□□□ -1.57
CDH12P55289 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.25□□□□□ -1.57
CDH12P55289 RN7SKP69-201ENST00000365390 305 ntBASIC5.25□□□□□ -1.57
CDH12P55289 RPL22P22-201ENST00000395439 379 ntBASIC5.25□□□□□ -1.57
CDH12P55289 TAF9BP2-201ENST00000400856 499 ntBASIC5.25□□□□□ -1.57
CDH12P55289 RPL10P10-201ENST00000403509 664 ntBASIC5.25□□□□□ -1.57
CDH12P55289 MTCO2P8-201ENST00000412213 658 ntBASIC5.25□□□□□ -1.57
CDH12P55289 AC079809.1-201ENST00000415468 276 ntBASIC5.25□□□□□ -1.57
CDH12P55289 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.25□□□□□ -1.57
CDH12P55289 VN1R42P-201ENST00000424651 344 ntBASIC5.25□□□□□ -1.57
CDH12P55289 MTCO2P23-201ENST00000425216 680 ntBASIC5.25□□□□□ -1.57
CDH12P55289 AC009784.1-201ENST00000426484 460 ntBASIC5.25□□□□□ -1.57
CDH12P55289 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.25□□□□□ -1.57
CDH12P55289 VN1R110P-201ENST00000438988 971 ntBASIC5.25□□□□□ -1.57
CDH12P55289 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.25□□□□□ -1.57
CDH12P55289 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH12P55289 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH12P55289 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.25□□□□□ -1.57
CDH12P55289 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH12P55289 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH12P55289 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH12P55289 AC068228.1-201ENST00000461723 211 ntBASIC5.25□□□□□ -1.57
CDH12P55289 RPSAP39-201ENST00000467439 883 ntBASIC5.25□□□□□ -1.57
CDH12P55289 SETP6-201ENST00000479329 568 ntBASIC5.25□□□□□ -1.57
CDH12P55289 RN7SL423P-201ENST00000486202 304 ntBASIC5.25□□□□□ -1.57
CDH12P55289 RN7SL57P-201ENST00000493687 290 ntBASIC5.25□□□□□ -1.57
CDH12P55289 SUMO1P1-201ENST00000497904 306 ntBASIC5.25□□□□□ -1.57
CDH12P55289 UBE2V1P12-201ENST00000503954 474 ntBASIC5.25□□□□□ -1.57
CDH12P55289 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH12P55289 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.25□□□□□ -1.57
CDH12P55289 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.25□□□□□ -1.57
CDH12P55289 RFPL4AP3-201ENST00000515267 345 ntBASIC5.25□□□□□ -1.57
CDH12P55289 SCARNA18.1-201ENST00000516330 83 ntBASIC5.25□□□□□ -1.57
CDH12P55289 MTND2P32-201ENST00000521584 1038 ntBASIC5.25□□□□□ -1.57
CDH12P55289 CIR1P1-201ENST00000524055 1133 ntBASIC5.25□□□□□ -1.57
CDH12P55289 IGLV3-30-201ENST00000524362 298 ntBASIC5.25□□□□□ -1.57
CDH12P55289 PCNAP4-201ENST00000532690 730 ntBASIC5.25□□□□□ -1.57
CDH12P55289 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH12P55289 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.25□□□□□ -1.57
CDH12P55289 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH12P55289 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH12P55289 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.25□□□□□ -1.57
CDH12P55289 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH12P55289 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH12P55289 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.25□□□□□ -1.57
CDH12P55289 EIF1P5-201ENST00000585002 234 ntBASIC5.25□□□□□ -1.57
CDH12P55289 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.25□□□□□ -1.57
CDH12P55289 BMS1P7-201ENST00000602440 1052 ntBASIC5.25□□□□□ -1.57
CDH12P55289 AC005034.4-201ENST00000603612 899 ntBASIC5.25□□□□□ -1.57
CDH12P55289 AL022394.1-201ENST00000606979 292 ntBASIC5.25□□□□□ -1.57
CDH12P55289 AC112503.1-201ENST00000608436 391 ntBASIC5.25□□□□□ -1.57
CDH12P55289 AP001033.2-201ENST00000609701 1003 ntBASIC5.25□□□□□ -1.57
CDH12P55289 MIR6806-201ENST00000622141 64 ntBASIC5.25□□□□□ -1.57
CDH12P55289 AL683826.1-201ENST00000624104 627 ntBASIC5.25□□□□□ -1.57
CDH12P55289 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.25□□□□□ -1.57
CDH12P55289 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.25□□□□□ -1.57
CDH12P55289 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CDH12P55289 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.25□□□□□ -1.57
CDH12P55289 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH12P55289 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CDH12P55289 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH12P55289 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.25□□□□□ -1.57
CDH12P55289 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CDH12P55289 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH12P55289 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.25□□□□□ -1.57
CDH12P55289 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH12P55289 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.24□□□□□ -1.57
CDH12P55289 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
CDH12P55289 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH12P55289 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CDH12P55289 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms