Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COPAP53621 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.04□□□□□ -1.44
COPAP53621 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
COPAP53621 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COPAP53621 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COPAP53621 RN7SKP128-201ENST00000364270 303 ntBASIC6.04□□□□□ -1.44
COPAP53621 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
COPAP53621 RNA5SP105-201ENST00000391123 113 ntBASIC6.04□□□□□ -1.44
COPAP53621 HMGB3P7-201ENST00000400214 611 ntBASIC6.04□□□□□ -1.44
COPAP53621 LSM5-206ENST00000409987 504 ntTSL 5 BASIC6.04□□□□□ -1.44
COPAP53621 RN7SKP286-201ENST00000410894 299 ntBASIC6.04□□□□□ -1.44
COPAP53621 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.04□□□□□ -1.44
COPAP53621 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.04□□□□□ -1.44
COPAP53621 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC6.04□□□□□ -1.44
COPAP53621 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.04□□□□□ -1.44
COPAP53621 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC6.04□□□□□ -1.44
COPAP53621 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.04□□□□□ -1.44
COPAP53621 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COPAP53621 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC6.04□□□□□ -1.44
COPAP53621 OSTCP1-201ENST00000455507 450 ntBASIC6.04□□□□□ -1.44
COPAP53621 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
COPAP53621 SNRPCP3-201ENST00000474888 476 ntBASIC6.04□□□□□ -1.44
COPAP53621 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.04□□□□□ -1.44
COPAP53621 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COPAP53621 AC083795.1-201ENST00000491760 320 ntBASIC6.04□□□□□ -1.44
COPAP53621 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.04□□□□□ -1.44
COPAP53621 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC6.04□□□□□ -1.44
COPAP53621 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.04□□□□□ -1.44
COPAP53621 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC6.04□□□□□ -1.44
COPAP53621 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COPAP53621 AC112191.2-201ENST00000522428 333 ntBASIC6.04□□□□□ -1.44
COPAP53621 AC136777.2-201ENST00000522979 358 ntBASIC6.04□□□□□ -1.44
COPAP53621 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COPAP53621 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.04□□□□□ -1.44
COPAP53621 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.04□□□□□ -1.44
COPAP53621 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.04□□□□□ -1.44
COPAP53621 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.04□□□□□ -1.44
COPAP53621 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.04□□□□□ -1.44
COPAP53621 AL158211.1-201ENST00000566763 763 ntBASIC6.04□□□□□ -1.44
COPAP53621 AC021483.2-201ENST00000567415 758 ntBASIC6.04□□□□□ -1.44
COPAP53621 AC119403.2-201ENST00000590960 598 ntBASIC6.04□□□□□ -1.44
COPAP53621 AC025857.2-201ENST00000602711 238 ntBASIC6.04□□□□□ -1.44
COPAP53621 AL122125.1-201ENST00000616999 600 ntBASIC6.04□□□□□ -1.44
COPAP53621 AC092159.4-201ENST00000624944 550 ntBASIC6.04□□□□□ -1.44
COPAP53621 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.04□□□□□ -1.44
COPAP53621 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COPAP53621 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.04□□□□□ -1.44
COPAP53621 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC6.04□□□□□ -1.44
COPAP53621 AL359715.4-201ENST00000606629 1436 ntBASIC6.04□□□□□ -1.44
COPAP53621 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.04□□□□□ -1.44
COPAP53621 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
COPAP53621 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COPAP53621 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
COPAP53621 AL355488.2-201ENST00000609909 2850 ntBASIC6.04□□□□□ -1.44
COPAP53621 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.04□□□□□ -1.44
COPAP53621 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
COPAP53621 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COPAP53621 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COPAP53621 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COPAP53621 AC132825.1-201ENST00000463573 2247 ntBASIC6.03□□□□□ -1.44
COPAP53621 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
COPAP53621 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COPAP53621 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.03□□□□□ -1.44
COPAP53621 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COPAP53621 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
COPAP53621 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.03□□□□□ -1.44
COPAP53621 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COPAP53621 OR10R3P-201ENST00000361688 942 ntBASIC6.03□□□□□ -1.44
COPAP53621 MIR375-201ENST00000362103 64 ntBASIC6.03□□□□□ -1.44
COPAP53621 RNU1-146P-201ENST00000364015 165 ntBASIC6.03□□□□□ -1.44
COPAP53621 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.03□□□□□ -1.44
COPAP53621 AC016739.1-201ENST00000405359 345 ntBASIC6.03□□□□□ -1.44
COPAP53621 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC6.03□□□□□ -1.44
COPAP53621 AC093155.2-201ENST00000420734 937 ntBASIC6.03□□□□□ -1.44
COPAP53621 NMD3P2-201ENST00000421815 761 ntBASIC6.03□□□□□ -1.44
COPAP53621 AC073410.1-201ENST00000435125 589 ntBASIC6.03□□□□□ -1.44
COPAP53621 RPL23AP60-201ENST00000450011 454 ntBASIC6.03□□□□□ -1.44
COPAP53621 RPL5P13-201ENST00000462840 709 ntBASIC6.03□□□□□ -1.44
COPAP53621 AC116562.1-201ENST00000485355 781 ntBASIC6.03□□□□□ -1.44
COPAP53621 RN7SL284P-201ENST00000498823 275 ntBASIC6.03□□□□□ -1.44
COPAP53621 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.03□□□□□ -1.44
COPAP53621 TMEM97P2-201ENST00000517841 403 ntBASIC6.03□□□□□ -1.44
COPAP53621 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC6.03□□□□□ -1.44
COPAP53621 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC6.03□□□□□ -1.44
COPAP53621 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC6.03□□□□□ -1.44
COPAP53621 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC6.03□□□□□ -1.44
COPAP53621 SNORD95-201ENST00000579879 68 ntBASIC6.03□□□□□ -1.44
COPAP53621 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.03□□□□□ -1.44
COPAP53621 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.03□□□□□ -1.44
COPAP53621 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC6.03□□□□□ -1.44
COPAP53621 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC6.03□□□□□ -1.44
COPAP53621 AC073137.1-201ENST00000605636 634 ntBASIC6.03□□□□□ -1.44
COPAP53621 AC034236.3-201ENST00000605999 461 ntBASIC6.03□□□□□ -1.44
COPAP53621 AP001033.2-201ENST00000609701 1003 ntBASIC6.03□□□□□ -1.44
COPAP53621 AL050303.3-201ENST00000613704 284 ntBASIC6.03□□□□□ -1.44
COPAP53621 TMEM30CP-203ENST00000637814 1035 ntBASIC6.03□□□□□ -1.44
COPAP53621 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
COPAP53621 AL121839.2-201ENST00000565058 6943 ntBASIC6.03□□□□□ -1.44
COPAP53621 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.03□□□□□ -1.44
COPAP53621 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms