Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.25□□□□□ -1.57
CXCL12P48061 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CXCL12P48061 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CXCL12P48061 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CXCL12P48061 RN7SKP113-201ENST00000363891 295 ntBASIC5.25□□□□□ -1.57
CXCL12P48061 RNA5SP428-201ENST00000365129 132 ntBASIC5.25□□□□□ -1.57
CXCL12P48061 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.25□□□□□ -1.57
CXCL12P48061 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.25□□□□□ -1.57
CXCL12P48061 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.25□□□□□ -1.57
CXCL12P48061 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.25□□□□□ -1.57
CXCL12P48061 AC073264.2-201ENST00000448886 166 ntBASIC5.25□□□□□ -1.57
CXCL12P48061 PSAT1P4-201ENST00000466500 526 ntBASIC5.25□□□□□ -1.57
CXCL12P48061 PPP1R11P1-201ENST00000486095 376 ntBASIC5.25□□□□□ -1.57
CXCL12P48061 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.25□□□□□ -1.57
CXCL12P48061 RPL23AP72-201ENST00000492447 435 ntBASIC5.25□□□□□ -1.57
CXCL12P48061 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.25□□□□□ -1.57
CXCL12P48061 COX6B1P5-201ENST00000509843 249 ntBASIC5.25□□□□□ -1.57
CXCL12P48061 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.25□□□□□ -1.57
CXCL12P48061 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.25□□□□□ -1.57
CXCL12P48061 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.25□□□□□ -1.57
CXCL12P48061 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.25□□□□□ -1.57
CXCL12P48061 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.25□□□□□ -1.57
CXCL12P48061 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CXCL12P48061 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.25□□□□□ -1.57
CXCL12P48061 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.25□□□□□ -1.57
CXCL12P48061 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CXCL12P48061 AC068790.4-201ENST00000602474 263 ntBASIC5.25□□□□□ -1.57
CXCL12P48061 AL627230.1-201ENST00000613077 211 ntBASIC5.25□□□□□ -1.57
CXCL12P48061 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.25□□□□□ -1.57
CXCL12P48061 AL591926.8-201ENST00000616876 211 ntBASIC5.25□□□□□ -1.57
CXCL12P48061 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.25□□□□□ -1.57
CXCL12P48061 AC009704.2-201ENST00000618739 483 ntBASIC5.25□□□□□ -1.57
CXCL12P48061 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.25□□□□□ -1.57
CXCL12P48061 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
CXCL12P48061 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.25□□□□□ -1.57
CXCL12P48061 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CXCL12P48061 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CXCL12P48061 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CXCL12P48061 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.24□□□□□ -1.57
CXCL12P48061 SAMMSON-210ENST00000641260 1308 ntBASIC5.24□□□□□ -1.57
CXCL12P48061 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.24□□□□□ -1.57
CXCL12P48061 AL158152.1-201ENST00000602652 1435 ntBASIC5.24□□□□□ -1.57
CXCL12P48061 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.24□□□□□ -1.57
CXCL12P48061 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.24□□□□□ -1.57
CXCL12P48061 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CXCL12P48061 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.24□□□□□ -1.57
CXCL12P48061 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
CXCL12P48061 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CXCL12P48061 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.24□□□□□ -1.57
CXCL12P48061 RNA5SP505-201ENST00000364748 108 ntBASIC5.24□□□□□ -1.57
CXCL12P48061 RNA5SP90-201ENST00000364801 99 ntBASIC5.24□□□□□ -1.57
CXCL12P48061 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.24□□□□□ -1.57
CXCL12P48061 SNORD56.6-201ENST00000384569 71 ntBASIC5.24□□□□□ -1.57
CXCL12P48061 RNU4-64P-201ENST00000410795 131 ntBASIC5.24□□□□□ -1.57
CXCL12P48061 MTND4LP17-201ENST00000414607 293 ntBASIC5.24□□□□□ -1.57
CXCL12P48061 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.24□□□□□ -1.57
CXCL12P48061 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.24□□□□□ -1.57
CXCL12P48061 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.24□□□□□ -1.57
CXCL12P48061 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.24□□□□□ -1.57
CXCL12P48061 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.24□□□□□ -1.57
CXCL12P48061 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.24□□□□□ -1.57
CXCL12P48061 AC063943.1-201ENST00000465434 453 ntBASIC5.24□□□□□ -1.57
CXCL12P48061 AC128716.1-201ENST00000475129 166 ntBASIC5.24□□□□□ -1.57
CXCL12P48061 RPS17P5-201ENST00000498293 408 ntBASIC5.24□□□□□ -1.57
CXCL12P48061 IGKV2D-10-201ENST00000520194 281 ntBASIC5.24□□□□□ -1.57
CXCL12P48061 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.24□□□□□ -1.57
CXCL12P48061 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.24□□□□□ -1.57
CXCL12P48061 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.24□□□□□ -1.57
CXCL12P48061 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.24□□□□□ -1.57
CXCL12P48061 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CXCL12P48061 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.24□□□□□ -1.57
CXCL12P48061 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.24□□□□□ -1.57
CXCL12P48061 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CXCL12P48061 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CXCL12P48061 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CXCL12P48061 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CXCL12P48061 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.24□□□□□ -1.57
CXCL12P48061 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CXCL12P48061 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CXCL12P48061 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CXCL12P48061 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CXCL12P48061 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CXCL12P48061 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.23□□□□□ -1.57
CXCL12P48061 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC5.23□□□□□ -1.57
CXCL12P48061 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
CXCL12P48061 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CXCL12P48061 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CXCL12P48061 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CXCL12P48061 RN7SKP114-201ENST00000410327 279 ntBASIC5.23□□□□□ -1.57
CXCL12P48061 AC092570.3-201ENST00000420113 693 ntBASIC5.23□□□□□ -1.57
CXCL12P48061 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.23□□□□□ -1.57
CXCL12P48061 USP24P1-201ENST00000433802 779 ntBASIC5.23□□□□□ -1.57
CXCL12P48061 RHOT1P3-201ENST00000436571 331 ntBASIC5.23□□□□□ -1.57
CXCL12P48061 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CXCL12P48061 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.23□□□□□ -1.57
CXCL12P48061 OR52J1P-201ENST00000450596 932 ntBASIC5.23□□□□□ -1.57
CXCL12P48061 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.23□□□□□ -1.57
CXCL12P48061 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.23□□□□□ -1.57
CXCL12P48061 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.23□□□□□ -1.57
CXCL12P48061 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 238.7 ms