Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.38□□□□□ -1.55
FDFT1P37268 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
FDFT1P37268 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
FDFT1P37268 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
FDFT1P37268 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
FDFT1P37268 AC092111.2-201ENST00000611627 1414 ntBASIC5.38□□□□□ -1.55
FDFT1P37268 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.38□□□□□ -1.55
FDFT1P37268 TCP1P3-201ENST00000414406 1498 ntBASIC5.38□□□□□ -1.55
FDFT1P37268 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
FDFT1P37268 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
FDFT1P37268 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
FDFT1P37268 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
FDFT1P37268 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.38□□□□□ -1.55
FDFT1P37268 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.37□□□□□ -1.55
FDFT1P37268 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
FDFT1P37268 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
FDFT1P37268 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
FDFT1P37268 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
FDFT1P37268 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.37□□□□□ -1.55
FDFT1P37268 MIR105-1-201ENST00000385222 81 ntBASIC5.37□□□□□ -1.55
FDFT1P37268 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.37□□□□□ -1.55
FDFT1P37268 CLUHP1-201ENST00000435012 1190 ntBASIC5.37□□□□□ -1.55
FDFT1P37268 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.37□□□□□ -1.55
FDFT1P37268 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
FDFT1P37268 MTND6P5-201ENST00000448266 512 ntBASIC5.37□□□□□ -1.55
FDFT1P37268 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.37□□□□□ -1.55
FDFT1P37268 AC104634.1-201ENST00000452720 462 ntBASIC5.37□□□□□ -1.55
FDFT1P37268 YWHAEP1-201ENST00000453697 763 ntBASIC5.37□□□□□ -1.55
FDFT1P37268 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.37□□□□□ -1.55
FDFT1P37268 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.37□□□□□ -1.55
FDFT1P37268 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.37□□□□□ -1.55
FDFT1P37268 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.37□□□□□ -1.55
FDFT1P37268 AC022404.1-201ENST00000555320 273 ntBASIC5.37□□□□□ -1.55
FDFT1P37268 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.37□□□□□ -1.55
FDFT1P37268 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.37□□□□□ -1.55
FDFT1P37268 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
FDFT1P37268 RBM22P1-201ENST00000578589 1214 ntBASIC5.37□□□□□ -1.55
FDFT1P37268 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.37□□□□□ -1.55
FDFT1P37268 MIR4472-2-201ENST00000582069 67 ntBASIC5.37□□□□□ -1.55
FDFT1P37268 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.37□□□□□ -1.55
FDFT1P37268 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.37□□□□□ -1.55
FDFT1P37268 WBP1LP8-201ENST00000617401 327 ntBASIC5.37□□□□□ -1.55
FDFT1P37268 MIR6778-201ENST00000617912 73 ntBASIC5.37□□□□□ -1.55
FDFT1P37268 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.37□□□□□ -1.55
FDFT1P37268 MIR8080-201ENST00000622224 89 ntBASIC5.37□□□□□ -1.55
FDFT1P37268 AC103703.1-201ENST00000634783 663 ntBASIC5.37□□□□□ -1.55
FDFT1P37268 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
FDFT1P37268 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
FDFT1P37268 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.37□□□□□ -1.55
FDFT1P37268 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
FDFT1P37268 CASC19-248ENST00000641674 1356 ntBASIC5.37□□□□□ -1.55
FDFT1P37268 AL034549.2-201ENST00000618285 3373 ntBASIC5.37□□□□□ -1.55
FDFT1P37268 CR382285.2-201ENST00000624662 1495 ntBASIC5.37□□□□□ -1.55
FDFT1P37268 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.36□□□□□ -1.55
FDFT1P37268 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
FDFT1P37268 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.36□□□□□ -1.55
FDFT1P37268 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
FDFT1P37268 AC007342.5-201ENST00000571340 2142 ntBASIC5.36□□□□□ -1.55
FDFT1P37268 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.36□□□□□ -1.55
FDFT1P37268 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
FDFT1P37268 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
FDFT1P37268 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.36□□□□□ -1.55
FDFT1P37268 TMSB4XP4-201ENST00000323496 618 ntBASIC5.36□□□□□ -1.55
FDFT1P37268 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
FDFT1P37268 OR8V1P-201ENST00000395193 873 ntBASIC5.36□□□□□ -1.55
FDFT1P37268 OR4K12P-201ENST00000406538 961 ntBASIC5.36□□□□□ -1.55
FDFT1P37268 NPM1P40-201ENST00000412758 733 ntBASIC5.36□□□□□ -1.55
FDFT1P37268 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.36□□□□□ -1.55
FDFT1P37268 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.36□□□□□ -1.55
FDFT1P37268 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.36□□□□□ -1.55
FDFT1P37268 KCTD9P1-201ENST00000430462 1167 ntBASIC5.36□□□□□ -1.55
FDFT1P37268 AC012075.1-201ENST00000436549 580 ntBASIC5.36□□□□□ -1.55
FDFT1P37268 CYCSP24-201ENST00000445119 316 ntBASIC5.36□□□□□ -1.55
FDFT1P37268 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.36□□□□□ -1.55
FDFT1P37268 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.36□□□□□ -1.55
FDFT1P37268 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.36□□□□□ -1.55
FDFT1P37268 AC027544.3-201ENST00000535082 757 ntBASIC5.36□□□□□ -1.55
FDFT1P37268 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
FDFT1P37268 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.36□□□□□ -1.55
FDFT1P37268 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.36□□□□□ -1.55
FDFT1P37268 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.36□□□□□ -1.55
FDFT1P37268 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.36□□□□□ -1.55
FDFT1P37268 AC008521.2-201ENST00000591021 259 ntBASIC5.36□□□□□ -1.55
FDFT1P37268 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.36□□□□□ -1.55
FDFT1P37268 AC008814.1-201ENST00000603797 406 ntBASIC5.36□□□□□ -1.55
FDFT1P37268 AC104695.2-201ENST00000605056 775 ntBASIC5.36□□□□□ -1.55
FDFT1P37268 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
FDFT1P37268 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
FDFT1P37268 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
FDFT1P37268 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
FDFT1P37268 AC025574.1-201ENST00000554784 1653 ntBASIC5.36□□□□□ -1.55
FDFT1P37268 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
FDFT1P37268 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
FDFT1P37268 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
FDFT1P37268 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
FDFT1P37268 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
FDFT1P37268 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
FDFT1P37268 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.36□□□□□ -1.55
FDFT1P37268 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
FDFT1P37268 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms