Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHRNA3P32297 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
CHRNA3P32297 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHRNA3P32297 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.66□□□□□ -1.5
CHRNA3P32297 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHRNA3P32297 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.66□□□□□ -1.5
CHRNA3P32297 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHRNA3P32297 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.66□□□□□ -1.5
CHRNA3P32297 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.66□□□□□ -1.5
CHRNA3P32297 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHRNA3P32297 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CHRNA3P32297 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.66□□□□□ -1.5
CHRNA3P32297 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHRNA3P32297 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHRNA3P32297 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.66□□□□□ -1.5
CHRNA3P32297 RNA5SP319-201ENST00000362768 119 ntBASIC5.66□□□□□ -1.5
CHRNA3P32297 RN7SKP162-201ENST00000363605 345 ntBASIC5.66□□□□□ -1.5
CHRNA3P32297 AC007618.1-201ENST00000366455 732 ntBASIC5.66□□□□□ -1.5
CHRNA3P32297 AC096644.3-201ENST00000416788 338 ntBASIC5.66□□□□□ -1.5
CHRNA3P32297 GTF3AP1-201ENST00000416942 1004 ntBASIC5.66□□□□□ -1.5
CHRNA3P32297 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CHRNA3P32297 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.66□□□□□ -1.5
CHRNA3P32297 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.66□□□□□ -1.5
CHRNA3P32297 SPRYD7P1-201ENST00000443861 570 ntBASIC5.66□□□□□ -1.5
CHRNA3P32297 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.66□□□□□ -1.5
CHRNA3P32297 AC239798.3-201ENST00000454459 408 ntBASIC5.66□□□□□ -1.5
CHRNA3P32297 RANP1-206ENST00000455094 651 ntBASIC5.66□□□□□ -1.5
CHRNA3P32297 AL133445.1-201ENST00000467051 452 ntBASIC5.66□□□□□ -1.5
CHRNA3P32297 RPS26P39-201ENST00000469206 341 ntBASIC5.66□□□□□ -1.5
CHRNA3P32297 AC100832.1-201ENST00000471945 383 ntBASIC5.66□□□□□ -1.5
CHRNA3P32297 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.66□□□□□ -1.5
CHRNA3P32297 AC026782.2-201ENST00000510845 636 ntBASIC5.66□□□□□ -1.5
CHRNA3P32297 BX510359.5-201ENST00000515651 304 ntBASIC5.66□□□□□ -1.5
CHRNA3P32297 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.66□□□□□ -1.5
CHRNA3P32297 AC090022.1-201ENST00000546569 311 ntBASIC5.66□□□□□ -1.5
CHRNA3P32297 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.66□□□□□ -1.5
CHRNA3P32297 AC244107.2-201ENST00000611773 76 ntBASIC5.66□□□□□ -1.5
CHRNA3P32297 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.66□□□□□ -1.5
CHRNA3P32297 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.66□□□□□ -1.5
CHRNA3P32297 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHRNA3P32297 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHRNA3P32297 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHRNA3P32297 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHRNA3P32297 AC079298.1-201ENST00000625026 1619 ntBASIC5.66□□□□□ -1.5
CHRNA3P32297 AC005005.4-201ENST00000623789 16698 ntBASIC5.66□□□□□ -1.5
CHRNA3P32297 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHRNA3P32297 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
CHRNA3P32297 RARSP1-201ENST00000542842 1418 ntBASIC5.65□□□□□ -1.5
CHRNA3P32297 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.65□□□□□ -1.5
CHRNA3P32297 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CHRNA3P32297 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CHRNA3P32297 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CHRNA3P32297 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CHRNA3P32297 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CHRNA3P32297 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CHRNA3P32297 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.65□□□□□ -1.5
CHRNA3P32297 RNU6-1331P-201ENST00000363658 106 ntBASIC5.65□□□□□ -1.5
CHRNA3P32297 MIR551A-201ENST00000385042 96 ntBASIC5.65□□□□□ -1.5
CHRNA3P32297 RNU2-22P-201ENST00000411266 212 ntBASIC5.65□□□□□ -1.5
CHRNA3P32297 NPM1P4-201ENST00000414095 812 ntBASIC5.65□□□□□ -1.5
CHRNA3P32297 MARK2P12-201ENST00000420129 585 ntBASIC5.65□□□□□ -1.5
CHRNA3P32297 PTP4A1P1-201ENST00000420539 515 ntBASIC5.65□□□□□ -1.5
CHRNA3P32297 UBE2V2P1-201ENST00000434717 398 ntBASIC5.65□□□□□ -1.5
CHRNA3P32297 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.65□□□□□ -1.5
CHRNA3P32297 AC007386.1-201ENST00000455212 582 ntBASIC5.65□□□□□ -1.5
CHRNA3P32297 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CHRNA3P32297 RN7SL51P-201ENST00000468230 285 ntBASIC5.65□□□□□ -1.5
CHRNA3P32297 RN7SL214P-201ENST00000487317 265 ntBASIC5.65□□□□□ -1.5
CHRNA3P32297 COX6B1P2-201ENST00000489624 230 ntBASIC5.65□□□□□ -1.5
CHRNA3P32297 RN7SL547P-201ENST00000490793 290 ntBASIC5.65□□□□□ -1.5
CHRNA3P32297 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.65□□□□□ -1.5
CHRNA3P32297 MYL12BP2-201ENST00000503948 512 ntBASIC5.65□□□□□ -1.5
CHRNA3P32297 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.65□□□□□ -1.5
CHRNA3P32297 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.65□□□□□ -1.5
CHRNA3P32297 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.65□□□□□ -1.5
CHRNA3P32297 OR8G3P-201ENST00000533406 921 ntBASIC5.65□□□□□ -1.5
CHRNA3P32297 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.65□□□□□ -1.5
CHRNA3P32297 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CHRNA3P32297 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.65□□□□□ -1.5
CHRNA3P32297 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CHRNA3P32297 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.65□□□□□ -1.5
CHRNA3P32297 AC012616.1-201ENST00000600294 197 ntBASIC5.65□□□□□ -1.5
CHRNA3P32297 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.65□□□□□ -1.5
CHRNA3P32297 BX323046.1-201ENST00000610145 535 ntBASIC5.65□□□□□ -1.5
CHRNA3P32297 MIR8080-201ENST00000622224 89 ntBASIC5.65□□□□□ -1.5
CHRNA3P32297 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.65□□□□□ -1.5
CHRNA3P32297 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
CHRNA3P32297 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.65□□□□□ -1.51
CHRNA3P32297 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CHRNA3P32297 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CHRNA3P32297 MTCO1P22-201ENST00000604619 1360 ntBASIC5.65□□□□□ -1.51
CHRNA3P32297 AC007342.5-201ENST00000571340 2142 ntBASIC5.65□□□□□ -1.51
CHRNA3P32297 AC073136.1-201ENST00000449426 2884 ntBASIC5.65□□□□□ -1.51
CHRNA3P32297 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
CHRNA3P32297 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNA3P32297 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNA3P32297 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNA3P32297 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNA3P32297 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNA3P32297 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms