Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.45□□□□□ -1.54
CDH3P22223 MRPS21P7-201ENST00000566937 238 ntBASIC5.45□□□□□ -1.54
CDH3P22223 AP000894.4-201ENST00000610185 483 ntBASIC5.45□□□□□ -1.54
CDH3P22223 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.45□□□□□ -1.54
CDH3P22223 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDH3P22223 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.45□□□□□ -1.54
CDH3P22223 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CDH3P22223 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDH3P22223 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDH3P22223 RLIMP2-201ENST00000427891 1563 ntBASIC5.45□□□□□ -1.54
CDH3P22223 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.45□□□□□ -1.54
CDH3P22223 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDH3P22223 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDH3P22223 AC083843.2-201ENST00000568248 6253 ntBASIC5.45□□□□□ -1.54
CDH3P22223 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDH3P22223 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.44□□□□□ -1.54
CDH3P22223 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CDH3P22223 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDH3P22223 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH3P22223 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH3P22223 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH3P22223 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDH3P22223 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
CDH3P22223 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH3P22223 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CDH3P22223 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.44□□□□□ -1.54
CDH3P22223 RN7SKP124-201ENST00000364730 341 ntBASIC5.44□□□□□ -1.54
CDH3P22223 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CDH3P22223 RNU6-1320P-201ENST00000390838 107 ntBASIC5.44□□□□□ -1.54
CDH3P22223 RNU6-1269P-201ENST00000391139 107 ntBASIC5.44□□□□□ -1.54
CDH3P22223 AL136116.2-201ENST00000404020 785 ntBASIC5.44□□□□□ -1.54
CDH3P22223 GPS2P1-201ENST00000411761 986 ntBASIC5.44□□□□□ -1.54
CDH3P22223 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC5.44□□□□□ -1.54
CDH3P22223 NENFP1-201ENST00000419476 466 ntBASIC5.44□□□□□ -1.54
CDH3P22223 HSPE1P16-201ENST00000426640 348 ntBASIC5.44□□□□□ -1.54
CDH3P22223 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.44□□□□□ -1.54
CDH3P22223 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.44□□□□□ -1.54
CDH3P22223 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.44□□□□□ -1.54
CDH3P22223 TCEA1P3-201ENST00000443005 880 ntBASIC5.44□□□□□ -1.54
CDH3P22223 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CDH3P22223 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.44□□□□□ -1.54
CDH3P22223 RBMY2TP-201ENST00000451162 947 ntBASIC5.44□□□□□ -1.54
CDH3P22223 MTND2P3-201ENST00000452458 470 ntBASIC5.44□□□□□ -1.54
CDH3P22223 AP000547.1-201ENST00000454360 617 ntBASIC5.44□□□□□ -1.54
CDH3P22223 AC083899.1-201ENST00000454465 3819 ntBASIC5.44□□□□□ -1.54
CDH3P22223 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.44□□□□□ -1.54
CDH3P22223 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.44□□□□□ -1.54
CDH3P22223 RNU6-599P-201ENST00000459383 107 ntBASIC5.44□□□□□ -1.54
CDH3P22223 RNU6-1193P-201ENST00000459461 107 ntBASIC5.44□□□□□ -1.54
CDH3P22223 RN7SL188P-201ENST00000469842 285 ntBASIC5.44□□□□□ -1.54
CDH3P22223 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDH3P22223 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDH3P22223 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.44□□□□□ -1.54
CDH3P22223 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.44□□□□□ -1.54
CDH3P22223 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDH3P22223 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.44□□□□□ -1.54
CDH3P22223 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.44□□□□□ -1.54
CDH3P22223 AL671862.1-201ENST00000515851 349 ntBASIC5.44□□□□□ -1.54
CDH3P22223 NRBF2P4-201ENST00000520874 850 ntBASIC5.44□□□□□ -1.54
CDH3P22223 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.44□□□□□ -1.54
CDH3P22223 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDH3P22223 SNRPGP1-201ENST00000553864 222 ntBASIC5.44□□□□□ -1.54
CDH3P22223 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.44□□□□□ -1.54
CDH3P22223 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.44□□□□□ -1.54
CDH3P22223 AC018552.1-201ENST00000562099 811 ntBASIC5.44□□□□□ -1.54
CDH3P22223 AGGF1P7-201ENST00000562369 913 ntBASIC5.44□□□□□ -1.54
CDH3P22223 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDH3P22223 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.44□□□□□ -1.54
CDH3P22223 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.44□□□□□ -1.54
CDH3P22223 MIR1273E-201ENST00000581165 102 ntBASIC5.44□□□□□ -1.54
CDH3P22223 AC005229.3-201ENST00000603438 323 ntBASIC5.44□□□□□ -1.54
CDH3P22223 NANOGP3-201ENST00000605855 286 ntBASIC5.44□□□□□ -1.54
CDH3P22223 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.44□□□□□ -1.54
CDH3P22223 AC109309.2-201ENST00000612597 332 ntBASIC5.44□□□□□ -1.54
CDH3P22223 AL354696.1-201ENST00000614652 497 ntBASIC5.44□□□□□ -1.54
CDH3P22223 AC015712.7-201ENST00000615211 635 ntBASIC5.44□□□□□ -1.54
CDH3P22223 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH3P22223 AL158062.1-201ENST00000619632 745 ntBASIC5.44□□□□□ -1.54
CDH3P22223 MIR6886-201ENST00000619864 61 ntBASIC5.44□□□□□ -1.54
CDH3P22223 RNU6-368P-201ENST00000620928 107 ntBASIC5.44□□□□□ -1.54
CDH3P22223 RNU6-538P-201ENST00000622329 107 ntBASIC5.44□□□□□ -1.54
CDH3P22223 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.44□□□□□ -1.54
CDH3P22223 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDH3P22223 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDH3P22223 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDH3P22223 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.44□□□□□ -1.54
CDH3P22223 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.44□□□□□ -1.54
CDH3P22223 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CDH3P22223 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH3P22223 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.44□□□□□ -1.54
CDH3P22223 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDH3P22223 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDH3P22223 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH3P22223 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.43□□□□□ -1.54
CDH3P22223 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH3P22223 AC107021.2-201ENST00000567714 2095 ntBASIC5.43□□□□□ -1.54
CDH3P22223 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
CDH3P22223 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.43□□□□□ -1.54
CDH3P22223 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH3P22223 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms