Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.33□□□□□ -1.56
XRCC1P18887 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.33□□□□□ -1.56
XRCC1P18887 AC126177.5-201ENST00000549599 178 ntBASIC5.33□□□□□ -1.56
XRCC1P18887 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.33□□□□□ -1.56
XRCC1P18887 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.33□□□□□ -1.56
XRCC1P18887 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.33□□□□□ -1.56
XRCC1P18887 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
XRCC1P18887 NPM1P45-201ENST00000583151 559 ntBASIC5.33□□□□□ -1.56
XRCC1P18887 OR7E18P-201ENST00000592589 702 ntBASIC5.33□□□□□ -1.56
XRCC1P18887 AC108738.1-201ENST00000603703 237 ntBASIC5.33□□□□□ -1.56
XRCC1P18887 AL512329.2-201ENST00000607350 548 ntBASIC5.33□□□□□ -1.56
XRCC1P18887 AL356608.1-201ENST00000610034 820 ntBASIC5.33□□□□□ -1.56
XRCC1P18887 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.33□□□□□ -1.56
XRCC1P18887 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.33□□□□□ -1.56
XRCC1P18887 AC008115.4-201ENST00000619780 775 ntBASIC5.33□□□□□ -1.56
XRCC1P18887 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.33□□□□□ -1.56
XRCC1P18887 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.33□□□□□ -1.56
XRCC1P18887 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
XRCC1P18887 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
XRCC1P18887 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
XRCC1P18887 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
XRCC1P18887 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.33□□□□□ -1.56
XRCC1P18887 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
XRCC1P18887 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
XRCC1P18887 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
XRCC1P18887 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
XRCC1P18887 THAP12P5-201ENST00000405864 2275 ntBASIC5.32□□□□□ -1.56
XRCC1P18887 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
XRCC1P18887 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.32□□□□□ -1.56
XRCC1P18887 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
XRCC1P18887 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.32□□□□□ -1.56
XRCC1P18887 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.32□□□□□ -1.56
XRCC1P18887 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
XRCC1P18887 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.32□□□□□ -1.56
XRCC1P18887 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.32□□□□□ -1.56
XRCC1P18887 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
XRCC1P18887 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
XRCC1P18887 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.32□□□□□ -1.56
XRCC1P18887 DSTNP5-201ENST00000427921 523 ntBASIC5.32□□□□□ -1.56
XRCC1P18887 RPL12P17-201ENST00000432393 498 ntBASIC5.32□□□□□ -1.56
XRCC1P18887 IGBP1P3-201ENST00000447449 1000 ntBASIC5.32□□□□□ -1.56
XRCC1P18887 AC090804.1-201ENST00000448870 490 ntBASIC5.32□□□□□ -1.56
XRCC1P18887 MYO5BP2-201ENST00000449815 1277 ntBASIC5.32□□□□□ -1.56
XRCC1P18887 RPS26P41-201ENST00000450370 284 ntBASIC5.32□□□□□ -1.56
XRCC1P18887 AL672138.1-201ENST00000450604 1015 ntBASIC5.32□□□□□ -1.56
XRCC1P18887 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.32□□□□□ -1.56
XRCC1P18887 PSAT1P4-201ENST00000466500 526 ntBASIC5.32□□□□□ -1.56
XRCC1P18887 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.32□□□□□ -1.56
XRCC1P18887 AC135999.1-201ENST00000478962 479 ntBASIC5.32□□□□□ -1.56
XRCC1P18887 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
XRCC1P18887 SUMO2P4-201ENST00000504193 276 ntBASIC5.32□□□□□ -1.56
XRCC1P18887 MTND6P2-201ENST00000512226 524 ntBASIC5.32□□□□□ -1.56
XRCC1P18887 AC098976.1-201ENST00000513014 541 ntBASIC5.32□□□□□ -1.56
XRCC1P18887 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.32□□□□□ -1.56
XRCC1P18887 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.32□□□□□ -1.56
XRCC1P18887 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.32□□□□□ -1.56
XRCC1P18887 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.32□□□□□ -1.56
XRCC1P18887 AC006363.1-201ENST00000603806 463 ntBASIC5.32□□□□□ -1.56
XRCC1P18887 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
XRCC1P18887 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.32□□□□□ -1.56
XRCC1P18887 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
XRCC1P18887 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
XRCC1P18887 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
XRCC1P18887 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
XRCC1P18887 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
XRCC1P18887 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
XRCC1P18887 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
XRCC1P18887 MRRFP1-201ENST00000435941 1675 ntBASIC5.31□□□□□ -1.56
XRCC1P18887 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
XRCC1P18887 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.31□□□□□ -1.56
XRCC1P18887 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.31□□□□□ -1.56
XRCC1P18887 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
XRCC1P18887 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
XRCC1P18887 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
XRCC1P18887 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
XRCC1P18887 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
XRCC1P18887 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
XRCC1P18887 RPSAP35-201ENST00000413753 818 ntBASIC5.31□□□□□ -1.56
XRCC1P18887 BMS1P13-201ENST00000417301 885 ntBASIC5.31□□□□□ -1.56
XRCC1P18887 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.31□□□□□ -1.56
XRCC1P18887 RPL7P56-201ENST00000429441 717 ntBASIC5.31□□□□□ -1.56
XRCC1P18887 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.31□□□□□ -1.56
XRCC1P18887 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.31□□□□□ -1.56
XRCC1P18887 MTCO3P17-201ENST00000443775 513 ntBASIC5.31□□□□□ -1.56
XRCC1P18887 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.31□□□□□ -1.56
XRCC1P18887 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.31□□□□□ -1.56
XRCC1P18887 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.31□□□□□ -1.56
XRCC1P18887 AP002371.1-201ENST00000463604 433 ntBASIC5.31□□□□□ -1.56
XRCC1P18887 UBA52P7-201ENST00000486088 380 ntBASIC5.31□□□□□ -1.56
XRCC1P18887 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.31□□□□□ -1.56
XRCC1P18887 AC016559.2-201ENST00000510759 359 ntBASIC5.31□□□□□ -1.56
XRCC1P18887 CDC42P3-201ENST00000518493 633 ntBASIC5.31□□□□□ -1.56
XRCC1P18887 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.31□□□□□ -1.56
XRCC1P18887 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.31□□□□□ -1.56
XRCC1P18887 AC004825.1-201ENST00000555068 586 ntBASIC5.31□□□□□ -1.56
XRCC1P18887 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.31□□□□□ -1.56
XRCC1P18887 MTCYBP13-201ENST00000578634 1093 ntBASIC5.31□□□□□ -1.56
XRCC1P18887 AP005403.1-201ENST00000579720 229 ntBASIC5.31□□□□□ -1.56
XRCC1P18887 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.31□□□□□ -1.56
XRCC1P18887 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms