Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SDC1P18827 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SDC1P18827 AC114947.2-201ENST00000565748 2125 ntBASIC4.99□□□□□ -1.61
SDC1P18827 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SDC1P18827 TMSB4XP4-201ENST00000323496 618 ntBASIC4.99□□□□□ -1.61
SDC1P18827 RNA5SP339-201ENST00000390987 122 ntBASIC4.99□□□□□ -1.61
SDC1P18827 AL121878.1-201ENST00000418638 859 ntBASIC4.99□□□□□ -1.61
SDC1P18827 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.99□□□□□ -1.61
SDC1P18827 KCTD9P1-201ENST00000430462 1167 ntBASIC4.99□□□□□ -1.61
SDC1P18827 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.99□□□□□ -1.61
SDC1P18827 RPL31P15-201ENST00000449770 338 ntBASIC4.99□□□□□ -1.61
SDC1P18827 YWHAEP1-201ENST00000453697 763 ntBASIC4.99□□□□□ -1.61
SDC1P18827 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.99□□□□□ -1.61
SDC1P18827 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.99□□□□□ -1.61
SDC1P18827 RPEP1-201ENST00000504507 658 ntBASIC4.99□□□□□ -1.61
SDC1P18827 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.99□□□□□ -1.61
SDC1P18827 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.99□□□□□ -1.61
SDC1P18827 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.99□□□□□ -1.61
SDC1P18827 AC027544.3-201ENST00000535082 757 ntBASIC4.99□□□□□ -1.61
SDC1P18827 AC025423.2-201ENST00000537570 439 ntBASIC4.99□□□□□ -1.61
SDC1P18827 AC006349.1-201ENST00000555526 235 ntBASIC4.99□□□□□ -1.61
SDC1P18827 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.99□□□□□ -1.61
SDC1P18827 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.99□□□□□ -1.61
SDC1P18827 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.99□□□□□ -1.61
SDC1P18827 AP000919.1-201ENST00000582850 985 ntBASIC4.99□□□□□ -1.61
SDC1P18827 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.99□□□□□ -1.61
SDC1P18827 AC008521.2-201ENST00000591021 259 ntBASIC4.99□□□□□ -1.61
SDC1P18827 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.99□□□□□ -1.61
SDC1P18827 AC127024.6-201ENST00000621598 424 ntBASIC4.99□□□□□ -1.61
SDC1P18827 AL691477.1-201ENST00000624398 162 ntBASIC4.99□□□□□ -1.61
SDC1P18827 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.99□□□□□ -1.61
SDC1P18827 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
SDC1P18827 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.99□□□□□ -1.61
SDC1P18827 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SDC1P18827 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.99□□□□□ -1.61
SDC1P18827 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
SDC1P18827 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SDC1P18827 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.99□□□□□ -1.61
SDC1P18827 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SDC1P18827 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
SDC1P18827 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SDC1P18827 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.99□□□□□ -1.61
SDC1P18827 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.99□□□□□ -1.61
SDC1P18827 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.99□□□□□ -1.61
SDC1P18827 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SDC1P18827 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SDC1P18827 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
SDC1P18827 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SDC1P18827 AL603750.1-201ENST00000624216 1717 ntBASIC4.98□□□□□ -1.61
SDC1P18827 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.98□□□□□ -1.61
SDC1P18827 HSPA8P14-201ENST00000552265 1805 ntBASIC4.98□□□□□ -1.61
SDC1P18827 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SDC1P18827 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SDC1P18827 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SDC1P18827 RNU1-74P-201ENST00000384108 171 ntBASIC4.98□□□□□ -1.61
SDC1P18827 RNU1-77P-201ENST00000390868 162 ntBASIC4.98□□□□□ -1.61
SDC1P18827 CASKP1-201ENST00000412870 582 ntBASIC4.98□□□□□ -1.61
SDC1P18827 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.98□□□□□ -1.61
SDC1P18827 MTND4LP21-201ENST00000415303 295 ntBASIC4.98□□□□□ -1.61
SDC1P18827 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.98□□□□□ -1.61
SDC1P18827 MARK2P12-201ENST00000420129 585 ntBASIC4.98□□□□□ -1.61
SDC1P18827 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.98□□□□□ -1.61
SDC1P18827 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.98□□□□□ -1.61
SDC1P18827 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.98□□□□□ -1.61
SDC1P18827 AL161722.2-201ENST00000434731 981 ntBASIC4.98□□□□□ -1.61
SDC1P18827 AL161636.2-201ENST00000445179 927 ntBASIC4.98□□□□□ -1.61
SDC1P18827 FCF1P7-201ENST00000451185 558 ntBASIC4.98□□□□□ -1.61
SDC1P18827 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SDC1P18827 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SDC1P18827 RPL7P40-201ENST00000481703 745 ntBASIC4.98□□□□□ -1.61
SDC1P18827 RN7SL447P-201ENST00000494711 245 ntBASIC4.98□□□□□ -1.61
SDC1P18827 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.98□□□□□ -1.61
SDC1P18827 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.98□□□□□ -1.61
SDC1P18827 HNRNPRP2-201ENST00000528421 743 ntBASIC4.98□□□□□ -1.61
SDC1P18827 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.98□□□□□ -1.61
SDC1P18827 NDUFA5P11-201ENST00000567995 343 ntBASIC4.98□□□□□ -1.61
SDC1P18827 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SDC1P18827 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.98□□□□□ -1.61
SDC1P18827 SUGT1P3-202ENST00000604259 383 ntBASIC4.98□□□□□ -1.61
SDC1P18827 FAM72A-208ENST00000607379 1139 ntBASIC4.98□□□□□ -1.61
SDC1P18827 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.98□□□□□ -1.61
SDC1P18827 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.98□□□□□ -1.61
SDC1P18827 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SDC1P18827 MIR6778-201ENST00000617912 73 ntBASIC4.98□□□□□ -1.61
SDC1P18827 AC118658.2-201ENST00000618697 459 ntBASIC4.98□□□□□ -1.61
SDC1P18827 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
SDC1P18827 AC104623.2-202ENST00000623477 4002 ntBASIC4.98□□□□□ -1.61
SDC1P18827 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SDC1P18827 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.98□□□□□ -1.61
SDC1P18827 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SDC1P18827 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
SDC1P18827 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SDC1P18827 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.98□□□□□ -1.61
SDC1P18827 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SDC1P18827 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
SDC1P18827 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.97□□□□□ -1.61
SDC1P18827 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SDC1P18827 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SDC1P18827 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.97□□□□□ -1.61
SDC1P18827 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms