Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.61□□□□□ -1.51
CTPS1P17812 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CTPS1P17812 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.61□□□□□ -1.51
CTPS1P17812 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.61□□□□□ -1.51
CTPS1P17812 AC126365.2-201ENST00000580630 379 ntBASIC5.61□□□□□ -1.51
CTPS1P17812 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
CTPS1P17812 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.61□□□□□ -1.51
CTPS1P17812 AC015911.5-201ENST00000587076 451 ntBASIC5.61□□□□□ -1.51
CTPS1P17812 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.61□□□□□ -1.51
CTPS1P17812 AP000473.2-201ENST00000602659 1537 ntBASIC5.61□□□□□ -1.51
CTPS1P17812 BNIP3P31-201ENST00000604515 566 ntBASIC5.61□□□□□ -1.51
CTPS1P17812 AC009501.3-201ENST00000605001 1352 ntBASIC5.61□□□□□ -1.51
CTPS1P17812 AC135178.6-201ENST00000605314 398 ntBASIC5.61□□□□□ -1.51
CTPS1P17812 CR589904.2-201ENST00000612533 440 ntBASIC5.61□□□□□ -1.51
CTPS1P17812 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CTPS1P17812 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.61□□□□□ -1.51
CTPS1P17812 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CTPS1P17812 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.61□□□□□ -1.51
CTPS1P17812 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CTPS1P17812 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CTPS1P17812 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CTPS1P17812 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.61□□□□□ -1.51
CTPS1P17812 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.61□□□□□ -1.51
CTPS1P17812 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CTPS1P17812 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CTPS1P17812 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTPS1P17812 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CTPS1P17812 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CTPS1P17812 CDC27P2-201ENST00000425026 1922 ntBASIC5.6□□□□□ -1.51
CTPS1P17812 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CTPS1P17812 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTPS1P17812 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CTPS1P17812 MT-RNR2-201ENST00000387347 1559 ntBASIC5.6□□□□□ -1.51
CTPS1P17812 AL356317.1-201ENST00000396110 1436 ntBASIC5.6□□□□□ -1.51
CTPS1P17812 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.6□□□□□ -1.51
CTPS1P17812 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTPS1P17812 MIR323A-201ENST00000362199 86 ntBASIC5.6□□□□□ -1.51
CTPS1P17812 RN7SKP28-201ENST00000364770 305 ntBASIC5.6□□□□□ -1.51
CTPS1P17812 RN7SKP269-201ENST00000365545 319 ntBASIC5.6□□□□□ -1.51
CTPS1P17812 AL512422.1-201ENST00000407033 553 ntBASIC5.6□□□□□ -1.51
CTPS1P17812 AL354868.1-201ENST00000417077 482 ntBASIC5.6□□□□□ -1.51
CTPS1P17812 AC012075.1-201ENST00000436549 580 ntBASIC5.6□□□□□ -1.51
CTPS1P17812 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.6□□□□□ -1.51
CTPS1P17812 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.6□□□□□ -1.51
CTPS1P17812 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.6□□□□□ -1.51
CTPS1P17812 XKRY2-201ENST00000442362 1093 ntBASIC5.6□□□□□ -1.51
CTPS1P17812 AC019185.1-201ENST00000442718 389 ntBASIC5.6□□□□□ -1.51
CTPS1P17812 RNF2P1-201ENST00000442955 1010 ntBASIC5.6□□□□□ -1.51
CTPS1P17812 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CTPS1P17812 BUD31P2-201ENST00000449374 300 ntBASIC5.6□□□□□ -1.51
CTPS1P17812 PPIAP20-201ENST00000449839 135 ntBASIC5.6□□□□□ -1.51
CTPS1P17812 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.6□□□□□ -1.51
CTPS1P17812 RPS27AP2-201ENST00000457576 465 ntBASIC5.6□□□□□ -1.51
CTPS1P17812 CABYRP1-201ENST00000465493 1045 ntBASIC5.6□□□□□ -1.51
CTPS1P17812 AC093663.2-201ENST00000484625 313 ntBASIC5.6□□□□□ -1.51
CTPS1P17812 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.6□□□□□ -1.51
CTPS1P17812 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.6□□□□□ -1.51
CTPS1P17812 RN7SKP34-201ENST00000516142 244 ntBASIC5.6□□□□□ -1.51
CTPS1P17812 VTA1P2-201ENST00000520205 911 ntBASIC5.6□□□□□ -1.51
CTPS1P17812 PMS2P3-207ENST00000529061 717 ntBASIC5.6□□□□□ -1.51
CTPS1P17812 AC113192.3-201ENST00000529152 742 ntBASIC5.6□□□□□ -1.51
CTPS1P17812 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CTPS1P17812 MTND5P21-201ENST00000531961 522 ntBASIC5.6□□□□□ -1.51
CTPS1P17812 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.6□□□□□ -1.51
CTPS1P17812 AC008126.1-201ENST00000549019 480 ntBASIC5.6□□□□□ -1.51
CTPS1P17812 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.6□□□□□ -1.51
CTPS1P17812 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.6□□□□□ -1.51
CTPS1P17812 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.6□□□□□ -1.51
CTPS1P17812 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.6□□□□□ -1.51
CTPS1P17812 MIR1273E-201ENST00000581165 102 ntBASIC5.6□□□□□ -1.51
CTPS1P17812 MIR4433B-201ENST00000581329 102 ntBASIC5.6□□□□□ -1.51
CTPS1P17812 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.6□□□□□ -1.51
CTPS1P17812 AP003117.1-201ENST00000602771 554 ntBASIC5.6□□□□□ -1.51
CTPS1P17812 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.6□□□□□ -1.51
CTPS1P17812 RNA5SP439-201ENST00000617595 124 ntBASIC5.6□□□□□ -1.51
CTPS1P17812 MIR6729-201ENST00000618194 65 ntBASIC5.6□□□□□ -1.51
CTPS1P17812 AL691477.1-201ENST00000624398 162 ntBASIC5.6□□□□□ -1.51
CTPS1P17812 AC007683.2-201ENST00000624681 714 ntBASIC5.6□□□□□ -1.51
CTPS1P17812 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC5.6□□□□□ -1.51
CTPS1P17812 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.6□□□□□ -1.51
CTPS1P17812 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.6□□□□□ -1.51
CTPS1P17812 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTPS1P17812 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CTPS1P17812 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTPS1P17812 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.6□□□□□ -1.51
CTPS1P17812 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
CTPS1P17812 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CTPS1P17812 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CTPS1P17812 HSPD1P7-201ENST00000447985 1686 ntBASIC5.59□□□□□ -1.51
CTPS1P17812 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CTPS1P17812 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CTPS1P17812 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CTPS1P17812 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CTPS1P17812 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CTPS1P17812 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CTPS1P17812 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CTPS1P17812 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
CTPS1P17812 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CTPS1P17812 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CTPS1P17812 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms