Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQB1P01920 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQB1P01920 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQB1P01920 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
HLA-DQB1P01920 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQB1P01920 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
HLA-DQB1P01920 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DQB1P01920 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DQB1P01920 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DQB1P01920 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
HLA-DQB1P01920 MIPEPP2-201ENST00000422560 1819 ntBASIC4.49□□□□□ -1.69
HLA-DQB1P01920 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DQB1P01920 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DQB1P01920 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DQB1P01920 HSPA8P18-201ENST00000439846 1928 ntBASIC4.49□□□□□ -1.69
HLA-DQB1P01920 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DQB1P01920 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HLA-DQB1P01920 AC004386.1-201ENST00000393214 761 ntBASIC4.49□□□□□ -1.69
HLA-DQB1P01920 AL035079.1-201ENST00000405210 287 ntBASIC4.49□□□□□ -1.69
HLA-DQB1P01920 AC127526.2-201ENST00000426436 775 ntBASIC4.49□□□□□ -1.69
HLA-DQB1P01920 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DQB1P01920 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
HLA-DQB1P01920 AL672138.1-201ENST00000450604 1015 ntBASIC4.49□□□□□ -1.69
HLA-DQB1P01920 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DQB1P01920 AC118758.1-202ENST00000454719 225 ntBASIC4.49□□□□□ -1.69
HLA-DQB1P01920 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DQB1P01920 GOLGA5P1-201ENST00000507317 980 ntBASIC4.49□□□□□ -1.69
HLA-DQB1P01920 RNU6-615P-201ENST00000516065 106 ntBASIC4.49□□□□□ -1.69
HLA-DQB1P01920 OR10D4P-201ENST00000525892 951 ntBASIC4.49□□□□□ -1.69
HLA-DQB1P01920 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DQB1P01920 IGBP1P1-201ENST00000554337 1009 ntBASIC4.49□□□□□ -1.69
HLA-DQB1P01920 AC015802.2-201ENST00000589690 189 ntBASIC4.49□□□□□ -1.69
HLA-DQB1P01920 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
HLA-DQB1P01920 AC091979.2-201ENST00000607514 214 ntBASIC4.49□□□□□ -1.69
HLA-DQB1P01920 AC244517.3-201ENST00000616254 1235 ntBASIC4.49□□□□□ -1.69
HLA-DQB1P01920 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HLA-DQB1P01920 AC008691.1-209ENST00000642094 814 ntBASIC4.49□□□□□ -1.69
HLA-DQB1P01920 AC120338.1-201ENST00000625074 1541 ntBASIC4.49□□□□□ -1.69
HLA-DQB1P01920 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
HLA-DQB1P01920 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DQB1P01920 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DQB1P01920 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DQB1P01920 CASC19-221ENST00000641309 1382 ntBASIC4.49□□□□□ -1.69
HLA-DQB1P01920 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DQB1P01920 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DQB1P01920 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DQB1P01920 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DQB1P01920 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HLA-DQB1P01920 SSXP3-201ENST00000442971 1300 ntBASIC4.48□□□□□ -1.69
HLA-DQB1P01920 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQB1P01920 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQB1P01920 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-DQB1P01920 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQB1P01920 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQB1P01920 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQB1P01920 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DQB1P01920 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HLA-DQB1P01920 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HLA-DQB1P01920 MIR375-201ENST00000362103 64 ntBASIC4.48□□□□□ -1.69
HLA-DQB1P01920 RNU4-44P-201ENST00000363050 141 ntBASIC4.48□□□□□ -1.69
HLA-DQB1P01920 RNA5SP433-201ENST00000364491 114 ntBASIC4.48□□□□□ -1.69
HLA-DQB1P01920 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HLA-DQB1P01920 AL390316.1-201ENST00000406279 553 ntBASIC4.48□□□□□ -1.69
HLA-DQB1P01920 GAPDHP42-201ENST00000406848 981 ntBASIC4.48□□□□□ -1.69
HLA-DQB1P01920 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-DQB1P01920 AC069154.1-201ENST00000432914 542 ntBASIC4.48□□□□□ -1.69
HLA-DQB1P01920 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DQB1P01920 NMNAT1P2-201ENST00000435192 860 ntBASIC4.48□□□□□ -1.69
HLA-DQB1P01920 PCNPP2-201ENST00000441651 455 ntBASIC4.48□□□□□ -1.69
HLA-DQB1P01920 AC005297.1-201ENST00000444765 862 ntBASIC4.48□□□□□ -1.69
HLA-DQB1P01920 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DQB1P01920 AC104339.1-201ENST00000465478 348 ntBASIC4.48□□□□□ -1.69
HLA-DQB1P01920 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DQB1P01920 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.48□□□□□ -1.69
HLA-DQB1P01920 AC114781.3-201ENST00000512083 142 ntBASIC4.48□□□□□ -1.69
HLA-DQB1P01920 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DQB1P01920 AC134698.5-201ENST00000519444 336 ntBASIC4.48□□□□□ -1.69
HLA-DQB1P01920 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.48□□□□□ -1.69
HLA-DQB1P01920 AC068305.2-201ENST00000550567 1205 ntBASIC4.48□□□□□ -1.69
HLA-DQB1P01920 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DQB1P01920 AC116553.2-201ENST00000564203 463 ntBASIC4.48□□□□□ -1.69
HLA-DQB1P01920 CYCSP40-201ENST00000575927 294 ntBASIC4.48□□□□□ -1.69
HLA-DQB1P01920 AC233280.2-201ENST00000603917 1070 ntBASIC4.48□□□□□ -1.69
HLA-DQB1P01920 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DQB1P01920 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DQB1P01920 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HLA-DQB1P01920 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.48□□□□□ -1.69
HLA-DQB1P01920 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQB1P01920 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQB1P01920 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQB1P01920 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQB1P01920 AC104118.1-201ENST00000607625 1589 ntBASIC4.48□□□□□ -1.69
HLA-DQB1P01920 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
HLA-DQB1P01920 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQB1P01920 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQB1P01920 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQB1P01920 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms