Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TNFP01375 MIR4436B2-201ENST00000581415 91 ntBASIC5.11□□□□□ -1.59
TNFP01375 MIR4436B1-201ENST00000583272 91 ntBASIC5.11□□□□□ -1.59
TNFP01375 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.11□□□□□ -1.59
TNFP01375 AC093799.2-201ENST00000610062 578 ntBASIC5.11□□□□□ -1.59
TNFP01375 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.11□□□□□ -1.59
TNFP01375 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.11□□□□□ -1.59
TNFP01375 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.11□□□□□ -1.59
TNFP01375 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.11□□□□□ -1.59
TNFP01375 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
TNFP01375 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
TNFP01375 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
TNFP01375 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TNFP01375 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.11□□□□□ -1.59
TNFP01375 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TNFP01375 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TNFP01375 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TNFP01375 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
TNFP01375 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TNFP01375 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
TNFP01375 RNA5SP455-201ENST00000365190 119 ntBASIC5.1□□□□□ -1.59
TNFP01375 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.1□□□□□ -1.59
TNFP01375 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.1□□□□□ -1.59
TNFP01375 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.1□□□□□ -1.59
TNFP01375 DDX39BP1-205ENST00000422507 192 ntBASIC5.1□□□□□ -1.59
TNFP01375 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TNFP01375 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.1□□□□□ -1.59
TNFP01375 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TNFP01375 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.1□□□□□ -1.59
TNFP01375 snoU13.20-201ENST00000459180 104 ntBASIC5.1□□□□□ -1.59
TNFP01375 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.1□□□□□ -1.59
TNFP01375 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TNFP01375 AC093827.1-201ENST00000480094 861 ntBASIC5.1□□□□□ -1.59
TNFP01375 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.1□□□□□ -1.59
TNFP01375 RPL7P41-201ENST00000485823 957 ntBASIC5.1□□□□□ -1.59
TNFP01375 RN7SL244P-201ENST00000493405 297 ntBASIC5.1□□□□□ -1.59
TNFP01375 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TNFP01375 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.1□□□□□ -1.59
TNFP01375 AP001922.4-201ENST00000526967 290 ntBASIC5.1□□□□□ -1.59
TNFP01375 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.1□□□□□ -1.59
TNFP01375 OR1F2P-201ENST00000570470 933 ntBASIC5.1□□□□□ -1.59
TNFP01375 AL583832.1-201ENST00000603227 784 ntBASIC5.1□□□□□ -1.59
TNFP01375 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.1□□□□□ -1.59
TNFP01375 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.1□□□□□ -1.59
TNFP01375 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.1□□□□□ -1.59
TNFP01375 AC091905.4-201ENST00000623432 202 ntBASIC5.1□□□□□ -1.59
TNFP01375 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
TNFP01375 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TNFP01375 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
TNFP01375 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
TNFP01375 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
TNFP01375 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TNFP01375 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TNFP01375 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
TNFP01375 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TNFP01375 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
TNFP01375 AC023421.1-201ENST00000590535 1785 ntBASIC5.09□□□□□ -1.59
TNFP01375 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TNFP01375 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
TNFP01375 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TNFP01375 NXF4-202ENST00000416098 1465 ntBASIC5.09□□□□□ -1.59
TNFP01375 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
TNFP01375 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
TNFP01375 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
TNFP01375 RN7SKP103-201ENST00000363848 320 ntBASIC5.09□□□□□ -1.59
TNFP01375 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TNFP01375 GJA6P-201ENST00000415117 1042 ntBASIC5.09□□□□□ -1.59
TNFP01375 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.09□□□□□ -1.59
TNFP01375 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.09□□□□□ -1.59
TNFP01375 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.09□□□□□ -1.59
TNFP01375 AC090018.1-201ENST00000434369 367 ntBASIC5.09□□□□□ -1.59
TNFP01375 AC023271.1-201ENST00000445936 1090 ntBASIC5.09□□□□□ -1.59
TNFP01375 HMGN2P25-201ENST00000486956 268 ntBASIC5.09□□□□□ -1.59
TNFP01375 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TNFP01375 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.09□□□□□ -1.59
TNFP01375 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.09□□□□□ -1.59
TNFP01375 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.09□□□□□ -1.59
TNFP01375 OR5D15P-201ENST00000531671 942 ntBASIC5.09□□□□□ -1.59
TNFP01375 PCNPP1-201ENST00000552501 511 ntBASIC5.09□□□□□ -1.59
TNFP01375 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.09□□□□□ -1.59
TNFP01375 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.09□□□□□ -1.59
TNFP01375 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TNFP01375 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.09□□□□□ -1.59
TNFP01375 AC011487.3-201ENST00000593607 453 ntBASIC5.09□□□□□ -1.59
TNFP01375 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.09□□□□□ -1.59
TNFP01375 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.09□□□□□ -1.59
TNFP01375 AC025857.2-201ENST00000602711 238 ntBASIC5.09□□□□□ -1.59
TNFP01375 AC008814.1-201ENST00000603797 406 ntBASIC5.09□□□□□ -1.59
TNFP01375 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.09□□□□□ -1.59
TNFP01375 AC116651.1-201ENST00000609724 556 ntBASIC5.09□□□□□ -1.59
TNFP01375 AL049539.1-201ENST00000611964 459 ntBASIC5.09□□□□□ -1.59
TNFP01375 MIR6133-201ENST00000617057 108 ntBASIC5.09□□□□□ -1.59
TNFP01375 MTCO1P1-201ENST00000624263 1081 ntBASIC5.09□□□□□ -1.59
TNFP01375 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.09□□□□□ -1.59
TNFP01375 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TNFP01375 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TNFP01375 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
TNFP01375 AL137058.3-201ENST00000624531 3099 ntBASIC5.09□□□□□ -1.6
TNFP01375 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
TNFP01375 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms