Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.19□□□□□ -1.58
SNX3O60493 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.19□□□□□ -1.58
SNX3O60493 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.19□□□□□ -1.58
SNX3O60493 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.19□□□□□ -1.58
SNX3O60493 OR6D1P-201ENST00000436165 939 ntBASIC5.19□□□□□ -1.58
SNX3O60493 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.19□□□□□ -1.58
SNX3O60493 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.19□□□□□ -1.58
SNX3O60493 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SNX3O60493 MTND6P32-201ENST00000457611 483 ntBASIC5.19□□□□□ -1.58
SNX3O60493 MRE11P1-201ENST00000464884 2127 ntBASIC5.19□□□□□ -1.58
SNX3O60493 AC022215.1-201ENST00000481770 362 ntBASIC5.19□□□□□ -1.58
SNX3O60493 RPL9P15-201ENST00000491096 532 ntBASIC5.19□□□□□ -1.58
SNX3O60493 SUMO2P4-201ENST00000504193 276 ntBASIC5.19□□□□□ -1.58
SNX3O60493 AC073358.1-201ENST00000505671 684 ntBASIC5.19□□□□□ -1.58
SNX3O60493 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.19□□□□□ -1.58
SNX3O60493 RNU6-760P-201ENST00000516078 97 ntBASIC5.19□□□□□ -1.58
SNX3O60493 AC027308.1-201ENST00000517993 110 ntBASIC5.19□□□□□ -1.58
SNX3O60493 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.19□□□□□ -1.58
SNX3O60493 AGGF1P9-201ENST00000561884 913 ntBASIC5.19□□□□□ -1.58
SNX3O60493 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC5.19□□□□□ -1.58
SNX3O60493 AL078601.3-201ENST00000573303 535 ntBASIC5.19□□□□□ -1.58
SNX3O60493 MIR4433B-201ENST00000581329 102 ntBASIC5.19□□□□□ -1.58
SNX3O60493 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.19□□□□□ -1.58
SNX3O60493 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.19□□□□□ -1.58
SNX3O60493 AL591222.2-201ENST00000604443 754 ntBASIC5.19□□□□□ -1.58
SNX3O60493 AC084036.1-201ENST00000609190 508 ntBASIC5.19□□□□□ -1.58
SNX3O60493 AL159169.2-201ENST00000610061 1269 ntBASIC5.19□□□□□ -1.58
SNX3O60493 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.19□□□□□ -1.58
SNX3O60493 AL162574.2-201ENST00000614618 657 ntBASIC5.19□□□□□ -1.58
SNX3O60493 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.19□□□□□ -1.58
SNX3O60493 AL163152.1-201ENST00000642001 374 ntBASIC5.19□□□□□ -1.58
SNX3O60493 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SNX3O60493 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SNX3O60493 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.19□□□□□ -1.58
SNX3O60493 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
SNX3O60493 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.18□□□□□ -1.58
SNX3O60493 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SNX3O60493 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.18□□□□□ -1.58
SNX3O60493 SALL4P2-201ENST00000423288 2910 ntBASIC5.18□□□□□ -1.58
SNX3O60493 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SNX3O60493 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.18□□□□□ -1.58
SNX3O60493 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SNX3O60493 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SNX3O60493 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.18□□□□□ -1.58
SNX3O60493 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SNX3O60493 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SNX3O60493 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.18□□□□□ -1.58
SNX3O60493 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.18□□□□□ -1.58
SNX3O60493 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.18□□□□□ -1.58
SNX3O60493 AMZ2P2-201ENST00000406819 1057 ntBASIC5.18□□□□□ -1.58
SNX3O60493 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.18□□□□□ -1.58
SNX3O60493 AC013429.2-201ENST00000418798 781 ntBASIC5.18□□□□□ -1.58
SNX3O60493 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.18□□□□□ -1.58
SNX3O60493 EIF4A1P1-201ENST00000420241 934 ntBASIC5.18□□□□□ -1.58
SNX3O60493 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.18□□□□□ -1.58
SNX3O60493 NAP1L4P2-201ENST00000425958 899 ntBASIC5.18□□□□□ -1.58
SNX3O60493 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.18□□□□□ -1.58
SNX3O60493 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.18□□□□□ -1.58
SNX3O60493 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.18□□□□□ -1.58
SNX3O60493 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.18□□□□□ -1.58
SNX3O60493 NPM1P33-201ENST00000438918 872 ntBASIC5.18□□□□□ -1.58
SNX3O60493 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.18□□□□□ -1.58
SNX3O60493 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.18□□□□□ -1.58
SNX3O60493 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.18□□□□□ -1.58
SNX3O60493 RN7SL254P-201ENST00000460609 284 ntBASIC5.18□□□□□ -1.58
SNX3O60493 AC090686.1-201ENST00000481577 749 ntBASIC5.18□□□□□ -1.58
SNX3O60493 AC122714.1-201ENST00000502510 459 ntBASIC5.18□□□□□ -1.58
SNX3O60493 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.18□□□□□ -1.58
SNX3O60493 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.18□□□□□ -1.58
SNX3O60493 MTND6P2-201ENST00000512226 524 ntBASIC5.18□□□□□ -1.58
SNX3O60493 RN7SKP238-201ENST00000516483 249 ntBASIC5.18□□□□□ -1.58
SNX3O60493 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC5.18□□□□□ -1.58
SNX3O60493 MRPS16P1-201ENST00000523462 412 ntBASIC5.18□□□□□ -1.58
SNX3O60493 OR10D4P-201ENST00000525892 951 ntBASIC5.18□□□□□ -1.58
SNX3O60493 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.18□□□□□ -1.58
SNX3O60493 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.18□□□□□ -1.58
SNX3O60493 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
SNX3O60493 RN7SL708P-201ENST00000580952 299 ntBASIC5.18□□□□□ -1.58
SNX3O60493 AC005520.3-201ENST00000602874 370 ntBASIC5.18□□□□□ -1.58
SNX3O60493 HMGB1P51-201ENST00000605166 638 ntBASIC5.18□□□□□ -1.58
SNX3O60493 U91328.4-201ENST00000608919 517 ntBASIC5.18□□□□□ -1.58
SNX3O60493 AL592494.3-201ENST00000609485 464 ntBASIC5.18□□□□□ -1.58
SNX3O60493 MIR6883-201ENST00000614952 78 ntBASIC5.18□□□□□ -1.58
SNX3O60493 AC012676.3-201ENST00000614983 479 ntBASIC5.18□□□□□ -1.58
SNX3O60493 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.18□□□□□ -1.58
SNX3O60493 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.18□□□□□ -1.58
SNX3O60493 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SNX3O60493 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
SNX3O60493 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.18□□□□□ -1.58
SNX3O60493 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.18□□□□□ -1.58
SNX3O60493 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.18□□□□□ -1.58
SNX3O60493 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SNX3O60493 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.18□□□□□ -1.58
SNX3O60493 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
SNX3O60493 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
SNX3O60493 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.17□□□□□ -1.58
SNX3O60493 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SNX3O60493 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SNX3O60493 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SNX3O60493 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms