Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.34□□□□□ -1.55
KDELR3O43731 AC105036.1-201ENST00000566222 271 ntBASIC5.34□□□□□ -1.55
KDELR3O43731 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
KDELR3O43731 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.34□□□□□ -1.55
KDELR3O43731 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.34□□□□□ -1.55
KDELR3O43731 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.34□□□□□ -1.55
KDELR3O43731 RNA5SP439-201ENST00000617595 124 ntBASIC5.34□□□□□ -1.55
KDELR3O43731 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.34□□□□□ -1.55
KDELR3O43731 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
KDELR3O43731 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.34□□□□□ -1.55
KDELR3O43731 NAMPTP1-201ENST00000440465 2514 ntBASIC5.34□□□□□ -1.56
KDELR3O43731 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
KDELR3O43731 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.34□□□□□ -1.56
KDELR3O43731 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
KDELR3O43731 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.34□□□□□ -1.56
KDELR3O43731 GVINP1-202ENST00000531871 7271 ntBASIC5.33□□□□□ -1.56
KDELR3O43731 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
KDELR3O43731 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KDELR3O43731 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.33□□□□□ -1.56
KDELR3O43731 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
KDELR3O43731 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KDELR3O43731 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
KDELR3O43731 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KDELR3O43731 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
KDELR3O43731 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
KDELR3O43731 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
KDELR3O43731 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
KDELR3O43731 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
KDELR3O43731 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
KDELR3O43731 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.33□□□□□ -1.56
KDELR3O43731 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
KDELR3O43731 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KDELR3O43731 RNU1-74P-201ENST00000384108 171 ntBASIC5.33□□□□□ -1.56
KDELR3O43731 MIR1182-201ENST00000408363 97 ntBASIC5.33□□□□□ -1.56
KDELR3O43731 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.33□□□□□ -1.56
KDELR3O43731 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.33□□□□□ -1.56
KDELR3O43731 AURKAPS1-201ENST00000451805 1212 ntBASIC5.33□□□□□ -1.56
KDELR3O43731 AC108751.3-201ENST00000461814 1020 ntBASIC5.33□□□□□ -1.56
KDELR3O43731 AC026348.1-201ENST00000462549 1053 ntBASIC5.33□□□□□ -1.56
KDELR3O43731 RN7SL799P-201ENST00000475891 298 ntBASIC5.33□□□□□ -1.56
KDELR3O43731 RN7SL814P-201ENST00000487715 300 ntBASIC5.33□□□□□ -1.56
KDELR3O43731 RPSAP51-201ENST00000497462 645 ntBASIC5.33□□□□□ -1.56
KDELR3O43731 AC006499.3-201ENST00000506077 748 ntBASIC5.33□□□□□ -1.56
KDELR3O43731 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.33□□□□□ -1.56
KDELR3O43731 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.33□□□□□ -1.56
KDELR3O43731 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.33□□□□□ -1.56
KDELR3O43731 HAUS8P1-201ENST00000549005 542 ntBASIC5.33□□□□□ -1.56
KDELR3O43731 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
KDELR3O43731 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
KDELR3O43731 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
KDELR3O43731 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
KDELR3O43731 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KDELR3O43731 RN7SL290P-201ENST00000578661 300 ntBASIC5.33□□□□□ -1.56
KDELR3O43731 RN7SL708P-201ENST00000580952 299 ntBASIC5.33□□□□□ -1.56
KDELR3O43731 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.33□□□□□ -1.56
KDELR3O43731 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.33□□□□□ -1.56
KDELR3O43731 MIR6839-201ENST00000620425 113 ntBASIC5.33□□□□□ -1.56
KDELR3O43731 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KDELR3O43731 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.33□□□□□ -1.56
KDELR3O43731 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KDELR3O43731 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
KDELR3O43731 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
KDELR3O43731 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KDELR3O43731 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
KDELR3O43731 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KDELR3O43731 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
KDELR3O43731 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
KDELR3O43731 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KDELR3O43731 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.33□□□□□ -1.56
KDELR3O43731 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
KDELR3O43731 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.32□□□□□ -1.56
KDELR3O43731 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.32□□□□□ -1.56
KDELR3O43731 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.32□□□□□ -1.56
KDELR3O43731 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KDELR3O43731 RN7SKP273-201ENST00000411392 314 ntBASIC5.32□□□□□ -1.56
KDELR3O43731 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.32□□□□□ -1.56
KDELR3O43731 EEF1B2P5-201ENST00000444820 548 ntBASIC5.32□□□□□ -1.56
KDELR3O43731 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.32□□□□□ -1.56
KDELR3O43731 AC005532.2-201ENST00000467154 373 ntBASIC5.32□□□□□ -1.56
KDELR3O43731 RN7SL214P-201ENST00000487317 265 ntBASIC5.32□□□□□ -1.56
KDELR3O43731 AC093763.2-201ENST00000505334 1223 ntBASIC5.32□□□□□ -1.56
KDELR3O43731 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.32□□□□□ -1.56
KDELR3O43731 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.32□□□□□ -1.56
KDELR3O43731 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
KDELR3O43731 AC022832.1-201ENST00000530718 645 ntBASIC5.32□□□□□ -1.56
KDELR3O43731 OR10G5P-201ENST00000532733 358 ntBASIC5.32□□□□□ -1.56
KDELR3O43731 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.32□□□□□ -1.56
KDELR3O43731 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.32□□□□□ -1.56
KDELR3O43731 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.32□□□□□ -1.56
KDELR3O43731 OR11J2P-201ENST00000555298 907 ntBASIC5.32□□□□□ -1.56
KDELR3O43731 NPM1P5-201ENST00000557228 838 ntBASIC5.32□□□□□ -1.56
KDELR3O43731 AC007066.2-202ENST00000566531 914 ntBASIC5.32□□□□□ -1.56
KDELR3O43731 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
KDELR3O43731 OR7E18P-201ENST00000592589 702 ntBASIC5.32□□□□□ -1.56
KDELR3O43731 AP005131.7-201ENST00000610087 611 ntBASIC5.32□□□□□ -1.56
KDELR3O43731 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KDELR3O43731 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KDELR3O43731 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
KDELR3O43731 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
KDELR3O43731 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms