Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 GNG5P5-201ENST00000420444 220 ntBASIC4.4□□□□□ -1.71
SDCBPO00560 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.4□□□□□ -1.71
SDCBPO00560 PRUNEP1-201ENST00000425846 705 ntBASIC4.4□□□□□ -1.71
SDCBPO00560 NAP1L4P2-201ENST00000425958 899 ntBASIC4.4□□□□□ -1.71
SDCBPO00560 MGAT2P2-201ENST00000427194 797 ntBASIC4.4□□□□□ -1.71
SDCBPO00560 GTF3AP5-201ENST00000442645 697 ntBASIC4.4□□□□□ -1.71
SDCBPO00560 GAPDHP25-201ENST00000447061 1001 ntBASIC4.4□□□□□ -1.71
SDCBPO00560 RN7SL189P-201ENST00000468631 289 ntBASIC4.4□□□□□ -1.71
SDCBPO00560 AC100832.1-201ENST00000471945 383 ntBASIC4.4□□□□□ -1.71
SDCBPO00560 RPL7P40-201ENST00000481703 745 ntBASIC4.4□□□□□ -1.71
SDCBPO00560 RN7SL423P-201ENST00000486202 304 ntBASIC4.4□□□□□ -1.71
SDCBPO00560 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.4□□□□□ -1.71
SDCBPO00560 AC090568.1-201ENST00000509499 856 ntBASIC4.4□□□□□ -1.71
SDCBPO00560 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.4□□□□□ -1.71
SDCBPO00560 HMGB1P40-201ENST00000525121 540 ntBASIC4.4□□□□□ -1.71
SDCBPO00560 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.4□□□□□ -1.71
SDCBPO00560 RN7SL708P-201ENST00000580952 299 ntBASIC4.4□□□□□ -1.71
SDCBPO00560 AC009597.2-201ENST00000604659 592 ntBASIC4.4□□□□□ -1.71
SDCBPO00560 AC010245.2-201ENST00000606908 1167 ntBASIC4.4□□□□□ -1.71
SDCBPO00560 AC000068.2-201ENST00000608816 460 ntBASIC4.4□□□□□ -1.71
SDCBPO00560 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
SDCBPO00560 AC126175.1-201ENST00000617041 758 ntBASIC4.4□□□□□ -1.71
SDCBPO00560 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.4□□□□□ -1.71
SDCBPO00560 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.4□□□□□ -1.71
SDCBPO00560 PCAT14-202ENST00000627127 3935 ntBASIC4.4□□□□□ -1.71
SDCBPO00560 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SDCBPO00560 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.4□□□□□ -1.71
SDCBPO00560 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.4□□□□□ -1.71
SDCBPO00560 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
SDCBPO00560 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.4□□□□□ -1.71
SDCBPO00560 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.4□□□□□ -1.71
SDCBPO00560 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SDCBPO00560 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SDCBPO00560 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SDCBPO00560 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SDCBPO00560 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SDCBPO00560 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SDCBPO00560 TET1P1-201ENST00000426627 2301 ntBASIC4.39□□□□□ -1.71
SDCBPO00560 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SDCBPO00560 AL022393.1-201ENST00000625142 1677 ntBASIC4.39□□□□□ -1.71
SDCBPO00560 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.39□□□□□ -1.71
SDCBPO00560 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SDCBPO00560 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.39□□□□□ -1.71
SDCBPO00560 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SDCBPO00560 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SDCBPO00560 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SDCBPO00560 MIR133B-201ENST00000362210 119 ntBASIC4.39□□□□□ -1.71
SDCBPO00560 RN7SKP124-201ENST00000364730 341 ntBASIC4.39□□□□□ -1.71
SDCBPO00560 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SDCBPO00560 RNA5SP487-201ENST00000410186 122 ntBASIC4.39□□□□□ -1.71
SDCBPO00560 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.39□□□□□ -1.71
SDCBPO00560 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.39□□□□□ -1.71
SDCBPO00560 OR5M12P-201ENST00000423388 929 ntBASIC4.39□□□□□ -1.71
SDCBPO00560 NANOGP4-201ENST00000427230 913 ntBASIC4.39□□□□□ -1.71
SDCBPO00560 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.39□□□□□ -1.71
SDCBPO00560 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.39□□□□□ -1.71
SDCBPO00560 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.39□□□□□ -1.71
SDCBPO00560 CLUHP1-201ENST00000435012 1190 ntBASIC4.39□□□□□ -1.71
SDCBPO00560 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.39□□□□□ -1.71
SDCBPO00560 BX842559.2-201ENST00000451418 605 ntBASIC4.39□□□□□ -1.71
SDCBPO00560 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.39□□□□□ -1.71
SDCBPO00560 DNAJB5P1-201ENST00000454004 806 ntBASIC4.39□□□□□ -1.71
SDCBPO00560 RANP1-206ENST00000455094 651 ntBASIC4.39□□□□□ -1.71
SDCBPO00560 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.39□□□□□ -1.71
SDCBPO00560 PPIAP19-201ENST00000486414 492 ntBASIC4.39□□□□□ -1.71
SDCBPO00560 RN7SL447P-201ENST00000494711 245 ntBASIC4.39□□□□□ -1.71
SDCBPO00560 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.39□□□□□ -1.71
SDCBPO00560 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.39□□□□□ -1.71
SDCBPO00560 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.39□□□□□ -1.71
SDCBPO00560 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.39□□□□□ -1.71
SDCBPO00560 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.39□□□□□ -1.71
SDCBPO00560 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.39□□□□□ -1.71
SDCBPO00560 BLZF2P-201ENST00000553776 1130 ntBASIC4.39□□□□□ -1.71
SDCBPO00560 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.39□□□□□ -1.71
SDCBPO00560 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.39□□□□□ -1.71
SDCBPO00560 RBM22P1-201ENST00000578589 1214 ntBASIC4.39□□□□□ -1.71
SDCBPO00560 AC104695.2-201ENST00000605056 775 ntBASIC4.39□□□□□ -1.71
SDCBPO00560 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SDCBPO00560 MIR8080-201ENST00000622224 89 ntBASIC4.39□□□□□ -1.71
SDCBPO00560 MTCO1P1-201ENST00000624263 1081 ntBASIC4.39□□□□□ -1.71
SDCBPO00560 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SDCBPO00560 AC074101.1-201ENST00000637861 241 ntBASIC4.39□□□□□ -1.71
SDCBPO00560 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SDCBPO00560 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SDCBPO00560 AL078595.2-201ENST00000605309 1780 ntBASIC4.39□□□□□ -1.71
SDCBPO00560 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
SDCBPO00560 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
SDCBPO00560 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SDCBPO00560 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SDCBPO00560 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SDCBPO00560 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SDCBPO00560 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.39□□□□□ -1.71
SDCBPO00560 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.39□□□□□ -1.71
SDCBPO00560 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.39□□□□□ -1.71
SDCBPO00560 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SDCBPO00560 SCARNA15-201ENST00000607520 4325 ntBASIC4.39□□□□□ -1.71
SDCBPO00560 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SDCBPO00560 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
SDCBPO00560 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.38□□□□□ -1.71
SDCBPO00560 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms