Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 SNORA16A-201ENST00000384342 137 ntBASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 CDY17P-201ENST00000414121 1282 ntBASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 LDHAP2-201ENST00000437325 985 ntBASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 AL138787.1-202ENST00000437804 898 ntBASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 VDAC2P4-201ENST00000452925 711 ntBASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 AC108729.1-201ENST00000487812 947 ntBASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 OOSP1P2-201ENST00000579644 351 ntBASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 MIR7853-201ENST00000584820 132 ntBASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 AC096947.1-201ENST00000603233 470 ntBASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 MIR8084-201ENST00000614105 89 ntBASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 AC073593.1-201ENST00000624500 411 ntBASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 AP003485.1-201ENST00000625093 753 ntBASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 OR4G3P-201ENST00000633500 913 ntBASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
TCRBV7S3A2A0A539 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TCRBV7S3A2A0A539 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
TCRBV7S3A2A0A539 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
TCRBV7S3A2A0A539 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
TCRBV7S3A2A0A539 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
TCRBV7S3A2A0A539 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TCRBV7S3A2A0A539 AL078621.3-201ENST00000623707 2042 ntBASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 MAPK10-328ENST00000641553 4009 ntBASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 AC093671.1-201ENST00000624981 2929 ntBASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 RNA5SP433-201ENST00000364491 114 ntBASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 RN7SKP69-201ENST00000365390 305 ntBASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 CBX1P3-201ENST00000413296 527 ntBASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 MRPS21P2-201ENST00000424704 264 ntBASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 AL662874.1-201ENST00000426065 230 ntBASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 AC115283.1-201ENST00000427353 400 ntBASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 OR6D1P-201ENST00000436165 939 ntBASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 DNAJA1P5-201ENST00000440278 943 ntBASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 AL358876.1-201ENST00000453364 1075 ntBASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 PSAT1P4-201ENST00000466500 526 ntBASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 AC011476.1-201ENST00000466725 307 ntBASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 AC010460.2-201ENST00000509054 677 ntBASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 HMGN1P9-201ENST00000515212 298 ntBASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 RNU6-615P-201ENST00000516065 106 ntBASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 SOX5P1-201ENST00000524155 1127 ntBASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.58□□□□□ -1.52
TCRBV7S3A2A0A539 AL158050.2-201ENST00000605336 568 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms