Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.41■□□□□ 0.7
SNX11Q9Y5W9 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.41■□□□□ 0.7
SNX11Q9Y5W9 B3GAT3P1-201ENST00000471720 806 ntBASIC19.41■□□□□ 0.7
SNX11Q9Y5W9 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX11Q9Y5W9 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX11Q9Y5W9 C2orf69P3-201ENST00000565542 1120 ntBASIC19.41■□□□□ 0.7
SNX11Q9Y5W9 AC026271.3-201ENST00000571884 352 ntBASIC19.41■□□□□ 0.7
SNX11Q9Y5W9 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.41■□□□□ 0.7
SNX11Q9Y5W9 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX11Q9Y5W9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX11Q9Y5W9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX11Q9Y5W9 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.41■□□□□ 0.7
SNX11Q9Y5W9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX11Q9Y5W9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX11Q9Y5W9 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.4■□□□□ 0.7
SNX11Q9Y5W9 AC116351.2-201ENST00000606540 1585 ntBASIC19.4■□□□□ 0.7
SNX11Q9Y5W9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX11Q9Y5W9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNX11Q9Y5W9 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNX11Q9Y5W9 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SNX11Q9Y5W9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX11Q9Y5W9 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SNX11Q9Y5W9 LIN28AP1-201ENST00000429574 405 ntBASIC19.4■□□□□ 0.7
SNX11Q9Y5W9 AC011506.1-201ENST00000474329 610 ntBASIC19.4■□□□□ 0.7
SNX11Q9Y5W9 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.4■□□□□ 0.7
SNX11Q9Y5W9 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SNX11Q9Y5W9 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SNX11Q9Y5W9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.4■□□□□ 0.7
SNX11Q9Y5W9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX11Q9Y5W9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.4■□□□□ 0.7
SNX11Q9Y5W9 TFP1-202ENST00000475455 1573 ntBASIC19.4■□□□□ 0.7
SNX11Q9Y5W9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX11Q9Y5W9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNX11Q9Y5W9 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.39■□□□□ 0.7
SNX11Q9Y5W9 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNX11Q9Y5W9 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.39■□□□□ 0.69
SNX11Q9Y5W9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SNX11Q9Y5W9 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNX11Q9Y5W9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.39■□□□□ 0.69
SNX11Q9Y5W9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SNX11Q9Y5W9 ECEL1P2-202ENST00000465689 757 ntBASIC19.39■□□□□ 0.69
SNX11Q9Y5W9 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
SNX11Q9Y5W9 AP005242.2-201ENST00000580065 1175 ntBASIC19.39■□□□□ 0.69
SNX11Q9Y5W9 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SNX11Q9Y5W9 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.39■□□□□ 0.69
SNX11Q9Y5W9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.39■□□□□ 0.69
SNX11Q9Y5W9 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SNX11Q9Y5W9 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNX11Q9Y5W9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNX11Q9Y5W9 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SNX11Q9Y5W9 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNX11Q9Y5W9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNX11Q9Y5W9 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SNX11Q9Y5W9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNX11Q9Y5W9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SNX11Q9Y5W9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SNX11Q9Y5W9 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNX11Q9Y5W9 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNX11Q9Y5W9 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNX11Q9Y5W9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNX11Q9Y5W9 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNX11Q9Y5W9 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNX11Q9Y5W9 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNX11Q9Y5W9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNX11Q9Y5W9 CRYGFP-201ENST00000418459 633 ntBASIC19.38■□□□□ 0.69
SNX11Q9Y5W9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.38■□□□□ 0.69
SNX11Q9Y5W9 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNX11Q9Y5W9 AC004980.1-204ENST00000429707 299 ntBASIC19.38■□□□□ 0.69
SNX11Q9Y5W9 YBX1P10-201ENST00000444752 975 ntBASIC19.38■□□□□ 0.69
SNX11Q9Y5W9 ATP5G1P1-201ENST00000448724 379 ntBASIC19.38■□□□□ 0.69
SNX11Q9Y5W9 LINC01521-201ENST00000504184 1943 ntBASIC19.38■□□□□ 0.69
SNX11Q9Y5W9 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SNX11Q9Y5W9 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.38■□□□□ 0.69
SNX11Q9Y5W9 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNX11Q9Y5W9 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.38■□□□□ 0.69
SNX11Q9Y5W9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SNX11Q9Y5W9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNX11Q9Y5W9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX11Q9Y5W9 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.37■□□□□ 0.69
SNX11Q9Y5W9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNX11Q9Y5W9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNX11Q9Y5W9 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX11Q9Y5W9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX11Q9Y5W9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.37■□□□□ 0.69
SNX11Q9Y5W9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNX11Q9Y5W9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.37■□□□□ 0.69
SNX11Q9Y5W9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.37■□□□□ 0.69
SNX11Q9Y5W9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX11Q9Y5W9 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNX11Q9Y5W9 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.37■□□□□ 0.69
SNX11Q9Y5W9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SNX11Q9Y5W9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX11Q9Y5W9 AC018553.1-201ENST00000616682 1458 ntBASIC19.37■□□□□ 0.69
SNX11Q9Y5W9 KRT16P6-202ENST00000425692 1426 ntBASIC19.37■□□□□ 0.69
SNX11Q9Y5W9 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNX11Q9Y5W9 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.37■□□□□ 0.69
SNX11Q9Y5W9 TUBB8P6-201ENST00000436895 1288 ntBASIC19.37■□□□□ 0.69
SNX11Q9Y5W9 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX11Q9Y5W9 AC097488.1-201ENST00000507834 756 ntBASIC19.37■□□□□ 0.69
SNX11Q9Y5W9 KRT18P16-201ENST00000510337 1294 ntBASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms