Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB3Q9Y5G1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB3Q9Y5G1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
PCDHGB3Q9Y5G1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 RNA5SP413-201ENST00000516373 109 ntBASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 MIR4651-201ENST00000582622 73 ntBASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 ITM2C-210ENST00000620962 501 ntBASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHGB3Q9Y5G1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB3Q9Y5G1 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
PCDHGB3Q9Y5G1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB3Q9Y5G1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PCDHGB3Q9Y5G1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB3Q9Y5G1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB3Q9Y5G1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDHGB3Q9Y5G1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
PCDHGB3Q9Y5G1 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDHGB3Q9Y5G1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHGB3Q9Y5G1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB3Q9Y5G1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB3Q9Y5G1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB3Q9Y5G1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHGB3Q9Y5G1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGB3Q9Y5G1 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGB3Q9Y5G1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHGB3Q9Y5G1 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHGB3Q9Y5G1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGB3Q9Y5G1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGB3Q9Y5G1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
PCDHGB3Q9Y5G1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGB3Q9Y5G1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGB3Q9Y5G1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGB3Q9Y5G1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGB3Q9Y5G1 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGB3Q9Y5G1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDHGB3Q9Y5G1 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGB3Q9Y5G1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDHGB3Q9Y5G1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGB3Q9Y5G1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDHGB3Q9Y5G1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGB3Q9Y5G1 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PCDHGB3Q9Y5G1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGB3Q9Y5G1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHGB3Q9Y5G1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.52■□□□□ 0.55
PCDHGB3Q9Y5G1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHGB3Q9Y5G1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
PCDHGB3Q9Y5G1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHGB3Q9Y5G1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHGB3Q9Y5G1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHGB3Q9Y5G1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGB3Q9Y5G1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGB3Q9Y5G1 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHGB3Q9Y5G1 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
PCDHGB3Q9Y5G1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHGB3Q9Y5G1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PCDHGB3Q9Y5G1 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGB3Q9Y5G1 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGB3Q9Y5G1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGB3Q9Y5G1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGB3Q9Y5G1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGB3Q9Y5G1 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGB3Q9Y5G1 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGB3Q9Y5G1 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGB3Q9Y5G1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGB3Q9Y5G1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGB3Q9Y5G1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.51■□□□□ 0.55
PCDHGB3Q9Y5G1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms