Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SND1-IT1Q9HBX3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SND1-IT1Q9HBX3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SND1-IT1Q9HBX3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SND1-IT1Q9HBX3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SND1-IT1Q9HBX3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SND1-IT1Q9HBX3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SND1-IT1Q9HBX3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SND1-IT1Q9HBX3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SND1-IT1Q9HBX3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SND1-IT1Q9HBX3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
SND1-IT1Q9HBX3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SND1-IT1Q9HBX3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 DUX4L2-201ENST00000561772 1275 ntBASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 FAM21FP-204ENST00000608637 956 ntBASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 DUX4L6-201ENST00000626483 1275 ntBASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 DUX4L1-201ENST00000627662 1275 ntBASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 DUX4L8-201ENST00000629013 1275 ntBASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 DUX4L3-201ENST00000630187 1275 ntBASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 DUX4L7-201ENST00000630678 1275 ntBASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 DUX4L5-201ENST00000630834 1275 ntBASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 GOLGA2P11-201ENST00000562660 1621 ntBASIC13.1□□□□□ -0.31
SND1-IT1Q9HBX3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 AC007322.3-201ENST00000426526 701 ntBASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 SLC7A5P2-201ENST00000553010 536 ntBASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC13.09□□□□□ -0.31
SND1-IT1Q9HBX3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC13.08□□□□□ -0.31
SND1-IT1Q9HBX3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SND1-IT1Q9HBX3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SND1-IT1Q9HBX3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
SND1-IT1Q9HBX3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SND1-IT1Q9HBX3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
SND1-IT1Q9HBX3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms