Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATXN3LQ9H3M9 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATXN3LQ9H3M9 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.58■□□□□ 0.89
ATXN3LQ9H3M9 TUBB8P6-201ENST00000436895 1288 ntBASIC20.58■□□□□ 0.89
ATXN3LQ9H3M9 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.58■□□□□ 0.89
ATXN3LQ9H3M9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATXN3LQ9H3M9 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.58■□□□□ 0.89
ATXN3LQ9H3M9 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.58■□□□□ 0.89
ATXN3LQ9H3M9 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
ATXN3LQ9H3M9 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
ATXN3LQ9H3M9 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.58■□□□□ 0.89
ATXN3LQ9H3M9 AL031985.4-201ENST00000642138 673 ntBASIC20.58■□□□□ 0.89
ATXN3LQ9H3M9 KRT8P9-201ENST00000558927 1449 ntBASIC20.58■□□□□ 0.88
ATXN3LQ9H3M9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATXN3LQ9H3M9 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATXN3LQ9H3M9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATXN3LQ9H3M9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.58■□□□□ 0.88
ATXN3LQ9H3M9 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATXN3LQ9H3M9 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
ATXN3LQ9H3M9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATXN3LQ9H3M9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATXN3LQ9H3M9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATXN3LQ9H3M9 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.57■□□□□ 0.88
ATXN3LQ9H3M9 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.57■□□□□ 0.88
ATXN3LQ9H3M9 AL390955.1-201ENST00000428694 934 ntBASIC20.57■□□□□ 0.88
ATXN3LQ9H3M9 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.57■□□□□ 0.88
ATXN3LQ9H3M9 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.57■□□□□ 0.88
ATXN3LQ9H3M9 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.57■□□□□ 0.88
ATXN3LQ9H3M9 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.57■□□□□ 0.88
ATXN3LQ9H3M9 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATXN3LQ9H3M9 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.57■□□□□ 0.88
ATXN3LQ9H3M9 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATXN3LQ9H3M9 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATXN3LQ9H3M9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ATXN3LQ9H3M9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATXN3LQ9H3M9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATXN3LQ9H3M9 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATXN3LQ9H3M9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATXN3LQ9H3M9 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATXN3LQ9H3M9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ATXN3LQ9H3M9 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATXN3LQ9H3M9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATXN3LQ9H3M9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATXN3LQ9H3M9 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.56■□□□□ 0.88
ATXN3LQ9H3M9 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.56■□□□□ 0.88
ATXN3LQ9H3M9 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.56■□□□□ 0.88
ATXN3LQ9H3M9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.56■□□□□ 0.88
ATXN3LQ9H3M9 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
ATXN3LQ9H3M9 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATXN3LQ9H3M9 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.56■□□□□ 0.88
ATXN3LQ9H3M9 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.56■□□□□ 0.88
ATXN3LQ9H3M9 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.56■□□□□ 0.88
ATXN3LQ9H3M9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATXN3LQ9H3M9 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ATXN3LQ9H3M9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ATXN3LQ9H3M9 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.56■□□□□ 0.88
ATXN3LQ9H3M9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
ATXN3LQ9H3M9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATXN3LQ9H3M9 AL512408.1-201ENST00000569378 2000 ntBASIC20.56■□□□□ 0.88
ATXN3LQ9H3M9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATXN3LQ9H3M9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATXN3LQ9H3M9 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATXN3LQ9H3M9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.55■□□□□ 0.88
ATXN3LQ9H3M9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATXN3LQ9H3M9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATXN3LQ9H3M9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATXN3LQ9H3M9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATXN3LQ9H3M9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.55■□□□□ 0.88
ATXN3LQ9H3M9 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.55■□□□□ 0.88
ATXN3LQ9H3M9 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATXN3LQ9H3M9 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATXN3LQ9H3M9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.55■□□□□ 0.88
ATXN3LQ9H3M9 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATXN3LQ9H3M9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.55■□□□□ 0.88
ATXN3LQ9H3M9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ATXN3LQ9H3M9 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATXN3LQ9H3M9 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATXN3LQ9H3M9 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.55■□□□□ 0.88
ATXN3LQ9H3M9 KRT18P16-201ENST00000510337 1294 ntBASIC20.55■□□□□ 0.88
ATXN3LQ9H3M9 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.55■□□□□ 0.88
ATXN3LQ9H3M9 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATXN3LQ9H3M9 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.55■□□□□ 0.88
ATXN3LQ9H3M9 AC145285.6-201ENST00000604632 637 ntBASIC20.55■□□□□ 0.88
ATXN3LQ9H3M9 AL445675.2-201ENST00000620291 557 ntBASIC20.55■□□□□ 0.88
ATXN3LQ9H3M9 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
ATXN3LQ9H3M9 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATXN3LQ9H3M9 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.55■□□□□ 0.88
ATXN3LQ9H3M9 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATXN3LQ9H3M9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.55■□□□□ 0.88
ATXN3LQ9H3M9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATXN3LQ9H3M9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
ATXN3LQ9H3M9 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATXN3LQ9H3M9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN3LQ9H3M9 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.54■□□□□ 0.88
ATXN3LQ9H3M9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ATXN3LQ9H3M9 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN3LQ9H3M9 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.54■□□□□ 0.88
ATXN3LQ9H3M9 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN3LQ9H3M9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN3LQ9H3M9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms