Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.31■□□□□ 0.2
GAFA1Q96PS6 TUBB8P6-201ENST00000436895 1288 ntBASIC16.31■□□□□ 0.2
GAFA1Q96PS6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.31■□□□□ 0.2
GAFA1Q96PS6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GAFA1Q96PS6 AC098590.1-201ENST00000468126 897 ntBASIC16.31■□□□□ 0.2
GAFA1Q96PS6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
GAFA1Q96PS6 AC004264.1-201ENST00000608354 794 ntBASIC16.31■□□□□ 0.2
GAFA1Q96PS6 AL359736.2-201ENST00000621992 437 ntBASIC16.31■□□□□ 0.2
GAFA1Q96PS6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.31■□□□□ 0.2
GAFA1Q96PS6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GAFA1Q96PS6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GAFA1Q96PS6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GAFA1Q96PS6 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.31■□□□□ 0.2
GAFA1Q96PS6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GAFA1Q96PS6 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
GAFA1Q96PS6 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
GAFA1Q96PS6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
GAFA1Q96PS6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.31■□□□□ 0.2
GAFA1Q96PS6 AL158211.5-201ENST00000623583 2518 ntBASIC16.3■□□□□ 0.2
GAFA1Q96PS6 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 AC110285.5-201ENST00000611501 352 ntBASIC16.3■□□□□ 0.2
GAFA1Q96PS6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GAFA1Q96PS6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
GAFA1Q96PS6 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GAFA1Q96PS6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.29■□□□□ 0.2
GAFA1Q96PS6 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.29■□□□□ 0.2
GAFA1Q96PS6 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.29■□□□□ 0.2
GAFA1Q96PS6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
GAFA1Q96PS6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GAFA1Q96PS6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
GAFA1Q96PS6 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
GAFA1Q96PS6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
GAFA1Q96PS6 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.29■□□□□ 0.2
GAFA1Q96PS6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.29■□□□□ 0.2
GAFA1Q96PS6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
GAFA1Q96PS6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.29■□□□□ 0.2
GAFA1Q96PS6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GAFA1Q96PS6 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.29■□□□□ 0.2
GAFA1Q96PS6 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.29■□□□□ 0.2
GAFA1Q96PS6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
GAFA1Q96PS6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
GAFA1Q96PS6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
GAFA1Q96PS6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.29■□□□□ 0.2
GAFA1Q96PS6 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GAFA1Q96PS6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GAFA1Q96PS6 KRT8P8-201ENST00000434750 1448 ntBASIC16.28■□□□□ 0.2
GAFA1Q96PS6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GAFA1Q96PS6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GAFA1Q96PS6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GAFA1Q96PS6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GAFA1Q96PS6 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.28■□□□□ 0.2
GAFA1Q96PS6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GAFA1Q96PS6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GAFA1Q96PS6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GAFA1Q96PS6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GAFA1Q96PS6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
GAFA1Q96PS6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GAFA1Q96PS6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.28■□□□□ 0.2
GAFA1Q96PS6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GAFA1Q96PS6 KRT16P5-201ENST00000455284 522 ntBASIC16.28■□□□□ 0.2
GAFA1Q96PS6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.28■□□□□ 0.2
GAFA1Q96PS6 AC142381.4-202ENST00000563973 229 ntBASIC16.28■□□□□ 0.2
GAFA1Q96PS6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.28■□□□□ 0.2
GAFA1Q96PS6 FAM197Y4-202ENST00000622692 608 ntBASIC16.28■□□□□ 0.2
GAFA1Q96PS6 TMEM191A-211ENST00000637163 1067 ntBASIC16.28■□□□□ 0.2
GAFA1Q96PS6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
GAFA1Q96PS6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
GAFA1Q96PS6 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms