Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.66■□□□□ 0.42
MS4A3Q96HJ5 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.66■□□□□ 0.42
MS4A3Q96HJ5 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MS4A3Q96HJ5 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MS4A3Q96HJ5 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MS4A3Q96HJ5 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MS4A3Q96HJ5 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MS4A3Q96HJ5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.66■□□□□ 0.42
MS4A3Q96HJ5 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
MS4A3Q96HJ5 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MS4A3Q96HJ5 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MS4A3Q96HJ5 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MS4A3Q96HJ5 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
MS4A3Q96HJ5 AL162377.1-201ENST00000618844 1793 ntBASIC17.66■□□□□ 0.42
MS4A3Q96HJ5 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MS4A3Q96HJ5 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
MS4A3Q96HJ5 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A3Q96HJ5 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A3Q96HJ5 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A3Q96HJ5 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A3Q96HJ5 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
MS4A3Q96HJ5 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A3Q96HJ5 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.65■□□□□ 0.42
MS4A3Q96HJ5 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A3Q96HJ5 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A3Q96HJ5 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A3Q96HJ5 AC099778.1-201ENST00000568593 1911 ntBASIC17.65■□□□□ 0.42
MS4A3Q96HJ5 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A3Q96HJ5 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.65■□□□□ 0.42
MS4A3Q96HJ5 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A3Q96HJ5 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MS4A3Q96HJ5 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A3Q96HJ5 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A3Q96HJ5 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.65■□□□□ 0.42
MS4A3Q96HJ5 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A3Q96HJ5 AC240504.1-201ENST00000395709 845 ntBASIC17.65■□□□□ 0.42
MS4A3Q96HJ5 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
MS4A3Q96HJ5 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
MS4A3Q96HJ5 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A3Q96HJ5 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
MS4A3Q96HJ5 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.65■□□□□ 0.42
MS4A3Q96HJ5 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.65■□□□□ 0.42
MS4A3Q96HJ5 AC087762.1-201ENST00000559755 643 ntTSL 3 BASIC17.65■□□□□ 0.42
MS4A3Q96HJ5 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
MS4A3Q96HJ5 AC018695.4-201ENST00000602706 689 ntTSL 5 BASIC17.65■□□□□ 0.42
MS4A3Q96HJ5 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A3Q96HJ5 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
MS4A3Q96HJ5 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A3Q96HJ5 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A3Q96HJ5 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
MS4A3Q96HJ5 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.64■□□□□ 0.42
MS4A3Q96HJ5 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
MS4A3Q96HJ5 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MS4A3Q96HJ5 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.64■□□□□ 0.41
MS4A3Q96HJ5 IL4-201ENST00000231449 616 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MS4A3Q96HJ5 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MS4A3Q96HJ5 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
MS4A3Q96HJ5 AC073210.2-201ENST00000430369 194 ntBASIC17.64■□□□□ 0.41
MS4A3Q96HJ5 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.64■□□□□ 0.41
MS4A3Q96HJ5 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.64■□□□□ 0.41
MS4A3Q96HJ5 AC082651.2-201ENST00000496833 166 ntBASIC17.64■□□□□ 0.41
MS4A3Q96HJ5 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.64■□□□□ 0.41
MS4A3Q96HJ5 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.64■□□□□ 0.41
MS4A3Q96HJ5 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC17.64■□□□□ 0.41
MS4A3Q96HJ5 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.64■□□□□ 0.41
MS4A3Q96HJ5 IL4-204ENST00000622422 717 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MS4A3Q96HJ5 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
MS4A3Q96HJ5 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MS4A3Q96HJ5 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MS4A3Q96HJ5 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
MS4A3Q96HJ5 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
MS4A3Q96HJ5 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MS4A3Q96HJ5 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
MS4A3Q96HJ5 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MS4A3Q96HJ5 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MS4A3Q96HJ5 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.64■□□□□ 0.41
MS4A3Q96HJ5 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 MTND1P31-201ENST00000449206 961 ntBASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 AC025423.2-201ENST00000537570 439 ntBASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 AC090506.2-201ENST00000624521 419 ntBASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 MYC-209ENST00000641252 345 ntBASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms