Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC39Q96DD0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC39Q96DD0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.78■□□□□ 0.76
LRRC39Q96DD0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC39Q96DD0 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC39Q96DD0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.77■□□□□ 0.76
LRRC39Q96DD0 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
LRRC39Q96DD0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC39Q96DD0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC39Q96DD0 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC39Q96DD0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.77■□□□□ 0.76
LRRC39Q96DD0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.77■□□□□ 0.76
LRRC39Q96DD0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC39Q96DD0 AL390719.1-204ENST00000412397 1219 ntBASIC19.77■□□□□ 0.76
LRRC39Q96DD0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
LRRC39Q96DD0 AF201337.1-201ENST00000520239 748 ntBASIC19.77■□□□□ 0.76
LRRC39Q96DD0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC39Q96DD0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC39Q96DD0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC39Q96DD0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
LRRC39Q96DD0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.77■□□□□ 0.76
LRRC39Q96DD0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
LRRC39Q96DD0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
LRRC39Q96DD0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.77■□□□□ 0.76
LRRC39Q96DD0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
LRRC39Q96DD0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC39Q96DD0 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LRRC39Q96DD0 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
LRRC39Q96DD0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LRRC39Q96DD0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
LRRC39Q96DD0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.76■□□□□ 0.75
LRRC39Q96DD0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.76■□□□□ 0.75
LRRC39Q96DD0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC39Q96DD0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC39Q96DD0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
LRRC39Q96DD0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC39Q96DD0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
LRRC39Q96DD0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC39Q96DD0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC39Q96DD0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.76■□□□□ 0.75
LRRC39Q96DD0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC39Q96DD0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC39Q96DD0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC39Q96DD0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.76■□□□□ 0.75
LRRC39Q96DD0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.76■□□□□ 0.75
LRRC39Q96DD0 AC005829.2-201ENST00000571422 1056 ntBASIC19.76■□□□□ 0.75
LRRC39Q96DD0 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.76■□□□□ 0.75
LRRC39Q96DD0 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.76■□□□□ 0.75
LRRC39Q96DD0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC39Q96DD0 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
LRRC39Q96DD0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC39Q96DD0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
LRRC39Q96DD0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC39Q96DD0 AC093503.3-201ENST00000624917 2352 ntBASIC19.76■□□□□ 0.75
LRRC39Q96DD0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.75■□□□□ 0.75
LRRC39Q96DD0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.75■□□□□ 0.75
LRRC39Q96DD0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.75■□□□□ 0.75
LRRC39Q96DD0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.75■□□□□ 0.75
LRRC39Q96DD0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
LRRC39Q96DD0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
LRRC39Q96DD0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LRRC39Q96DD0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.75■□□□□ 0.75
LRRC39Q96DD0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC39Q96DD0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.75■□□□□ 0.75
LRRC39Q96DD0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
LRRC39Q96DD0 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC39Q96DD0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.75■□□□□ 0.75
LRRC39Q96DD0 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LRRC39Q96DD0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC39Q96DD0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC39Q96DD0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC39Q96DD0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
LRRC39Q96DD0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC39Q96DD0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC39Q96DD0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC39Q96DD0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC39Q96DD0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
LRRC39Q96DD0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
LRRC39Q96DD0 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRC39Q96DD0 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.74■□□□□ 0.75
LRRC39Q96DD0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LRRC39Q96DD0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.74■□□□□ 0.75
LRRC39Q96DD0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.74■□□□□ 0.75
LRRC39Q96DD0 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LRRC39Q96DD0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
LRRC39Q96DD0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRC39Q96DD0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LRRC39Q96DD0 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.74■□□□□ 0.75
LRRC39Q96DD0 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.74■□□□□ 0.75
LRRC39Q96DD0 AC105036.2-201ENST00000569468 176 ntBASIC19.74■□□□□ 0.75
LRRC39Q96DD0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.74■□□□□ 0.75
LRRC39Q96DD0 AC080038.1-201ENST00000611274 1154 ntBASIC19.74■□□□□ 0.75
LRRC39Q96DD0 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
LRRC39Q96DD0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
LRRC39Q96DD0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRC39Q96DD0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC39Q96DD0 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC39Q96DD0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC39Q96DD0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC39Q96DD0 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms