Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
C3orf56Q8N813 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C3orf56Q8N813 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C3orf56Q8N813 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C3orf56Q8N813 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC15.32■□□□□ 0.04
C3orf56Q8N813 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C3orf56Q8N813 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C3orf56Q8N813 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
C3orf56Q8N813 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
C3orf56Q8N813 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C3orf56Q8N813 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C3orf56Q8N813 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.32■□□□□ 0.04
C3orf56Q8N813 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
C3orf56Q8N813 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.32■□□□□ 0.04
C3orf56Q8N813 AC116407.4-201ENST00000623319 1061 ntBASIC15.32■□□□□ 0.04
C3orf56Q8N813 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
C3orf56Q8N813 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C3orf56Q8N813 PALM-207ENST00000590161 2137 ntTSL 4 BASIC15.32■□□□□ 0.04
C3orf56Q8N813 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.32■□□□□ 0.04
C3orf56Q8N813 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C3orf56Q8N813 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC15.32■□□□□ 0.04
C3orf56Q8N813 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.32■□□□□ 0.04
C3orf56Q8N813 RCC2P6-201ENST00000526625 1557 ntBASIC15.32■□□□□ 0.04
C3orf56Q8N813 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
C3orf56Q8N813 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
C3orf56Q8N813 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C3orf56Q8N813 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
C3orf56Q8N813 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C3orf56Q8N813 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
C3orf56Q8N813 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C3orf56Q8N813 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C3orf56Q8N813 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
C3orf56Q8N813 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
C3orf56Q8N813 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
C3orf56Q8N813 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
C3orf56Q8N813 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
C3orf56Q8N813 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.31■□□□□ 0.04
C3orf56Q8N813 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C3orf56Q8N813 YBX1P10-201ENST00000444752 975 ntBASIC15.31■□□□□ 0.04
C3orf56Q8N813 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.31■□□□□ 0.04
C3orf56Q8N813 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C3orf56Q8N813 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.31■□□□□ 0.04
C3orf56Q8N813 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
C3orf56Q8N813 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
C3orf56Q8N813 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C3orf56Q8N813 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C3orf56Q8N813 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C3orf56Q8N813 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
C3orf56Q8N813 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
C3orf56Q8N813 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
C3orf56Q8N813 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C3orf56Q8N813 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.3■□□□□ 0.04
C3orf56Q8N813 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C3orf56Q8N813 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
C3orf56Q8N813 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
C3orf56Q8N813 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
C3orf56Q8N813 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C3orf56Q8N813 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C3orf56Q8N813 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
C3orf56Q8N813 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
C3orf56Q8N813 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
C3orf56Q8N813 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC15.3■□□□□ 0.04
C3orf56Q8N813 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC15.3■□□□□ 0.04
C3orf56Q8N813 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
C3orf56Q8N813 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.3■□□□□ 0.04
C3orf56Q8N813 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC15.3■□□□□ 0.04
C3orf56Q8N813 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
C3orf56Q8N813 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC15.3■□□□□ 0.04
C3orf56Q8N813 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC15.3■□□□□ 0.04
C3orf56Q8N813 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.3■□□□□ 0.04
C3orf56Q8N813 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
C3orf56Q8N813 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.3■□□□□ 0.04
C3orf56Q8N813 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
C3orf56Q8N813 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.3■□□□□ 0.04
C3orf56Q8N813 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
C3orf56Q8N813 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
C3orf56Q8N813 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
C3orf56Q8N813 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C3orf56Q8N813 C1orf229-201ENST00000623686 2258 ntBASIC15.29■□□□□ 0.04
C3orf56Q8N813 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C3orf56Q8N813 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC15.29■□□□□ 0.04
C3orf56Q8N813 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C3orf56Q8N813 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C3orf56Q8N813 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C3orf56Q8N813 STK25-204ENST00000405585 1643 ntTSL 2 BASIC15.29■□□□□ 0.04
C3orf56Q8N813 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C3orf56Q8N813 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
C3orf56Q8N813 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
C3orf56Q8N813 AL391422.3-201ENST00000603791 2761 ntBASIC15.29■□□□□ 0.04
C3orf56Q8N813 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.29■□□□□ 0.04
C3orf56Q8N813 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C3orf56Q8N813 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C3orf56Q8N813 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
C3orf56Q8N813 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.29■□□□□ 0.04
C3orf56Q8N813 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.29■□□□□ 0.04
C3orf56Q8N813 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.29■□□□□ 0.04
C3orf56Q8N813 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.29■□□□□ 0.04
C3orf56Q8N813 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.29■□□□□ 0.04
C3orf56Q8N813 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C3orf56Q8N813 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms