Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCN4BQ8IWT1 BX088651.1-201ENST00000540551 451 ntBASIC20.68■□□□□ 0.9
SCN4BQ8IWT1 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCN4BQ8IWT1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.68■□□□□ 0.9
SCN4BQ8IWT1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.68■□□□□ 0.9
SCN4BQ8IWT1 REXO1L12P-201ENST00000622156 912 ntBASIC20.68■□□□□ 0.9
SCN4BQ8IWT1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN4BQ8IWT1 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCN4BQ8IWT1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN4BQ8IWT1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN4BQ8IWT1 KRT16P1-201ENST00000399124 1418 ntBASIC20.68■□□□□ 0.9
SCN4BQ8IWT1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
SCN4BQ8IWT1 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN4BQ8IWT1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCN4BQ8IWT1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.67■□□□□ 0.9
SCN4BQ8IWT1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN4BQ8IWT1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN4BQ8IWT1 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.67■□□□□ 0.9
SCN4BQ8IWT1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN4BQ8IWT1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCN4BQ8IWT1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.67■□□□□ 0.9
SCN4BQ8IWT1 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN4BQ8IWT1 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.67■□□□□ 0.9
SCN4BQ8IWT1 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.67■□□□□ 0.9
SCN4BQ8IWT1 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.67■□□□□ 0.9
SCN4BQ8IWT1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SCN4BQ8IWT1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.67■□□□□ 0.9
SCN4BQ8IWT1 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN4BQ8IWT1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN4BQ8IWT1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCN4BQ8IWT1 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN4BQ8IWT1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCN4BQ8IWT1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SCN4BQ8IWT1 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN4BQ8IWT1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.66■□□□□ 0.9
SCN4BQ8IWT1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.66■□□□□ 0.9
SCN4BQ8IWT1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN4BQ8IWT1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN4BQ8IWT1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN4BQ8IWT1 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SCN4BQ8IWT1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN4BQ8IWT1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SCN4BQ8IWT1 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN4BQ8IWT1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.66■□□□□ 0.9
SCN4BQ8IWT1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SCN4BQ8IWT1 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.66■□□□□ 0.9
SCN4BQ8IWT1 NUDT16P1-203ENST00000513809 620 ntBASIC20.66■□□□□ 0.9
SCN4BQ8IWT1 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.66■□□□□ 0.9
SCN4BQ8IWT1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.66■□□□□ 0.9
SCN4BQ8IWT1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCN4BQ8IWT1 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.66■□□□□ 0.9
SCN4BQ8IWT1 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.66■□□□□ 0.9
SCN4BQ8IWT1 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCN4BQ8IWT1 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCN4BQ8IWT1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.66■□□□□ 0.9
SCN4BQ8IWT1 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.66■□□□□ 0.9
SCN4BQ8IWT1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCN4BQ8IWT1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SCN4BQ8IWT1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCN4BQ8IWT1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCN4BQ8IWT1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
SCN4BQ8IWT1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SCN4BQ8IWT1 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.66■□□□□ 0.9
SCN4BQ8IWT1 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN4BQ8IWT1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.65■□□□□ 0.9
SCN4BQ8IWT1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SCN4BQ8IWT1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.65■□□□□ 0.9
SCN4BQ8IWT1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SCN4BQ8IWT1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.65■□□□□ 0.9
SCN4BQ8IWT1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SCN4BQ8IWT1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.65■□□□□ 0.9
SCN4BQ8IWT1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN4BQ8IWT1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.65■□□□□ 0.9
SCN4BQ8IWT1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN4BQ8IWT1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SCN4BQ8IWT1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.65■□□□□ 0.9
SCN4BQ8IWT1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN4BQ8IWT1 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCN4BQ8IWT1 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
SCN4BQ8IWT1 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.65■□□□□ 0.9
SCN4BQ8IWT1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN4BQ8IWT1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SCN4BQ8IWT1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SCN4BQ8IWT1 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SCN4BQ8IWT1 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SCN4BQ8IWT1 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SCN4BQ8IWT1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.64■□□□□ 0.89
SCN4BQ8IWT1 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.64■□□□□ 0.89
SCN4BQ8IWT1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.64■□□□□ 0.89
SCN4BQ8IWT1 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SCN4BQ8IWT1 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SCN4BQ8IWT1 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SCN4BQ8IWT1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.64■□□□□ 0.89
SCN4BQ8IWT1 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.64■□□□□ 0.89
SCN4BQ8IWT1 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.64■□□□□ 0.89
SCN4BQ8IWT1 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.64■□□□□ 0.89
SCN4BQ8IWT1 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.64■□□□□ 0.89
SCN4BQ8IWT1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SCN4BQ8IWT1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.64■□□□□ 0.89
SCN4BQ8IWT1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms