Protein–RNA interactions for Protein: Q86UP3

ZFHX4, Zinc finger homeobox protein 4, humanhuman

Predictions only

Length 3,567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4Q86UP3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ZFHX4Q86UP3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ZFHX4Q86UP3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.43■□□□□ 0.54
ZFHX4Q86UP3 AC112497.1-201ENST00000624824 639 ntBASIC18.43■□□□□ 0.54
ZFHX4Q86UP3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ZFHX4Q86UP3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ZFHX4Q86UP3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.43■□□□□ 0.54
ZFHX4Q86UP3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
ZFHX4Q86UP3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.43■□□□□ 0.54
ZFHX4Q86UP3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ZFHX4Q86UP3 AL390719.2-201ENST00000606993 987 ntBASIC18.43■□□□□ 0.54
ZFHX4Q86UP3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.43■□□□□ 0.54
ZFHX4Q86UP3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
ZFHX4Q86UP3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZFHX4Q86UP3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
ZFHX4Q86UP3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ZFHX4Q86UP3 YBX1P10-201ENST00000444752 975 ntBASIC18.42■□□□□ 0.54
ZFHX4Q86UP3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.42■□□□□ 0.54
ZFHX4Q86UP3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.42■□□□□ 0.54
ZFHX4Q86UP3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
ZFHX4Q86UP3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZFHX4Q86UP3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZFHX4Q86UP3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ZFHX4Q86UP3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZFHX4Q86UP3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZFHX4Q86UP3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZFHX4Q86UP3 SLC25A1P2-201ENST00000430693 912 ntBASIC18.42■□□□□ 0.54
ZFHX4Q86UP3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
ZFHX4Q86UP3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZFHX4Q86UP3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ZFHX4Q86UP3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ZFHX4Q86UP3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZFHX4Q86UP3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZFHX4Q86UP3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.42■□□□□ 0.54
ZFHX4Q86UP3 AL441883.1-201ENST00000566170 1045 ntBASIC18.42■□□□□ 0.54
ZFHX4Q86UP3 AC055717.3-201ENST00000622967 595 ntBASIC18.42■□□□□ 0.54
ZFHX4Q86UP3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ZFHX4Q86UP3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.41■□□□□ 0.54
ZFHX4Q86UP3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZFHX4Q86UP3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZFHX4Q86UP3 SPDYE13P-201ENST00000445314 798 ntBASIC18.41■□□□□ 0.54
ZFHX4Q86UP3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZFHX4Q86UP3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZFHX4Q86UP3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZFHX4Q86UP3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZFHX4Q86UP3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZFHX4Q86UP3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ZFHX4Q86UP3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZFHX4Q86UP3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZFHX4Q86UP3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.41■□□□□ 0.54
ZFHX4Q86UP3 CCR12P-201ENST00000446203 998 ntBASIC18.41■□□□□ 0.54
ZFHX4Q86UP3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
ZFHX4Q86UP3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZFHX4Q86UP3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZFHX4Q86UP3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.41■□□□□ 0.54
ZFHX4Q86UP3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZFHX4Q86UP3 C1QL1P1-201ENST00000568105 661 ntBASIC18.41■□□□□ 0.54
ZFHX4Q86UP3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZFHX4Q86UP3 RCC2P6-201ENST00000526625 1557 ntBASIC18.41■□□□□ 0.54
ZFHX4Q86UP3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.4■□□□□ 0.54
ZFHX4Q86UP3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZFHX4Q86UP3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZFHX4Q86UP3 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.4■□□□□ 0.54
ZFHX4Q86UP3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.4■□□□□ 0.54
ZFHX4Q86UP3 AC079781.3-201ENST00000449110 356 ntBASIC18.4■□□□□ 0.54
ZFHX4Q86UP3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZFHX4Q86UP3 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ZFHX4Q86UP3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZFHX4Q86UP3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZFHX4Q86UP3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZFHX4Q86UP3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZFHX4Q86UP3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.4■□□□□ 0.54
ZFHX4Q86UP3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZFHX4Q86UP3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZFHX4Q86UP3 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZFHX4Q86UP3 AC242852.2-201ENST00000615738 1807 ntBASIC18.4■□□□□ 0.54
ZFHX4Q86UP3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZFHX4Q86UP3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZFHX4Q86UP3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.4■□□□□ 0.54
ZFHX4Q86UP3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.4■□□□□ 0.54
ZFHX4Q86UP3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.4■□□□□ 0.54
ZFHX4Q86UP3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ZFHX4Q86UP3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
ZFHX4Q86UP3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
ZFHX4Q86UP3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.39■□□□□ 0.53
ZFHX4Q86UP3 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZFHX4Q86UP3 AL590627.1-203ENST00000421194 1026 ntBASIC18.39■□□□□ 0.53
ZFHX4Q86UP3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZFHX4Q86UP3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZFHX4Q86UP3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZFHX4Q86UP3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZFHX4Q86UP3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZFHX4Q86UP3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZFHX4Q86UP3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.39■□□□□ 0.53
ZFHX4Q86UP3 PRSS44-201ENST00000515154 1146 ntBASIC18.39■□□□□ 0.53
ZFHX4Q86UP3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.39■□□□□ 0.53
ZFHX4Q86UP3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
ZFHX4Q86UP3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZFHX4Q86UP3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZFHX4Q86UP3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms