Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.28■□□□□ 0.68
LYSMD4Q5XG99 KRT18P48-201ENST00000434763 852 ntBASIC19.28■□□□□ 0.68
LYSMD4Q5XG99 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.28■□□□□ 0.68
LYSMD4Q5XG99 AL353719.1-201ENST00000566847 864 ntBASIC19.28■□□□□ 0.68
LYSMD4Q5XG99 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.28■□□□□ 0.68
LYSMD4Q5XG99 AC140113.3-201ENST00000605663 199 ntBASIC19.28■□□□□ 0.68
LYSMD4Q5XG99 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LYSMD4Q5XG99 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD4Q5XG99 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD4Q5XG99 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD4Q5XG99 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
LYSMD4Q5XG99 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD4Q5XG99 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LYSMD4Q5XG99 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.27■□□□□ 0.68
LYSMD4Q5XG99 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LYSMD4Q5XG99 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LYSMD4Q5XG99 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.27■□□□□ 0.68
LYSMD4Q5XG99 FAM86EP-206ENST00000510506 987 ntBASIC19.27■□□□□ 0.68
LYSMD4Q5XG99 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.27■□□□□ 0.68
LYSMD4Q5XG99 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.27■□□□□ 0.68
LYSMD4Q5XG99 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.27■□□□□ 0.68
LYSMD4Q5XG99 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.27■□□□□ 0.68
LYSMD4Q5XG99 AL121894.2-201ENST00000602977 491 ntBASIC19.27■□□□□ 0.68
LYSMD4Q5XG99 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
LYSMD4Q5XG99 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LYSMD4Q5XG99 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
LYSMD4Q5XG99 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
LYSMD4Q5XG99 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LYSMD4Q5XG99 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LYSMD4Q5XG99 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.26■□□□□ 0.67
LYSMD4Q5XG99 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD4Q5XG99 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.26■□□□□ 0.67
LYSMD4Q5XG99 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD4Q5XG99 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD4Q5XG99 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD4Q5XG99 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD4Q5XG99 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD4Q5XG99 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD4Q5XG99 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.26■□□□□ 0.67
LYSMD4Q5XG99 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.26■□□□□ 0.67
LYSMD4Q5XG99 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.26■□□□□ 0.67
LYSMD4Q5XG99 AL671277.2-201ENST00000458060 996 ntBASIC19.26■□□□□ 0.67
LYSMD4Q5XG99 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD4Q5XG99 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.26■□□□□ 0.67
LYSMD4Q5XG99 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.26■□□□□ 0.67
LYSMD4Q5XG99 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.26■□□□□ 0.67
LYSMD4Q5XG99 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.26■□□□□ 0.67
LYSMD4Q5XG99 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.26■□□□□ 0.67
LYSMD4Q5XG99 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
LYSMD4Q5XG99 AC093458.2-201ENST00000623150 629 ntBASIC19.26■□□□□ 0.67
LYSMD4Q5XG99 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD4Q5XG99 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.26■□□□□ 0.67
LYSMD4Q5XG99 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD4Q5XG99 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD4Q5XG99 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LYSMD4Q5XG99 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 AF106564.1-201ENST00000607058 2553 ntBASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 AL359075.1-203ENST00000462729 1002 ntBASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 CA15P1-201ENST00000481698 905 ntBASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD4Q5XG99 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LYSMD4Q5XG99 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LYSMD4Q5XG99 EP400NL-214ENST00000641289 2402 ntBASIC19.24■□□□□ 0.67
LYSMD4Q5XG99 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
LYSMD4Q5XG99 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.24■□□□□ 0.67
LYSMD4Q5XG99 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.24■□□□□ 0.67
LYSMD4Q5XG99 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
LYSMD4Q5XG99 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LYSMD4Q5XG99 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.24■□□□□ 0.67
LYSMD4Q5XG99 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms