Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH12P55289 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
CDH12P55289 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH12P55289 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH12P55289 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH12P55289 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH12P55289 AC010980.2-201ENST00000587099 1412 ntBASIC18.23■□□□□ 0.51
CDH12P55289 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH12P55289 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CDH12P55289 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH12P55289 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH12P55289 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CDH12P55289 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CDH12P55289 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH12P55289 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH12P55289 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH12P55289 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH12P55289 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CDH12P55289 AC004911.1-201ENST00000416316 871 ntBASIC18.23■□□□□ 0.51
CDH12P55289 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.23■□□□□ 0.51
CDH12P55289 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH12P55289 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.23■□□□□ 0.51
CDH12P55289 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
CDH12P55289 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.23■□□□□ 0.51
CDH12P55289 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH12P55289 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH12P55289 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH12P55289 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH12P55289 KRT8P20-201ENST00000423953 1409 ntBASIC18.23■□□□□ 0.51
CDH12P55289 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH12P55289 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.22■□□□□ 0.51
CDH12P55289 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH12P55289 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CDH12P55289 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDH12P55289 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDH12P55289 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDH12P55289 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH12P55289 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH12P55289 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH12P55289 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH12P55289 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDH12P55289 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH12P55289 AC093787.1-201ENST00000450396 207 ntBASIC18.22■□□□□ 0.51
CDH12P55289 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.22■□□□□ 0.51
CDH12P55289 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH12P55289 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH12P55289 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDH12P55289 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH12P55289 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDH12P55289 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH12P55289 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.22■□□□□ 0.51
CDH12P55289 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDH12P55289 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH12P55289 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDH12P55289 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH12P55289 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH12P55289 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH12P55289 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDH12P55289 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.22■□□□□ 0.51
CDH12P55289 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CDH12P55289 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CDH12P55289 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH12P55289 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH12P55289 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
CDH12P55289 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CDH12P55289 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
CDH12P55289 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.21■□□□□ 0.51
CDH12P55289 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.21■□□□□ 0.51
CDH12P55289 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.21■□□□□ 0.51
CDH12P55289 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.21■□□□□ 0.51
CDH12P55289 AC005181.1-201ENST00000604782 1256 ntBASIC18.21■□□□□ 0.51
CDH12P55289 AL589743.5-201ENST00000616611 1050 ntBASIC18.21■□□□□ 0.51
CDH12P55289 AC092437.1-201ENST00000624794 1048 ntBASIC18.21■□□□□ 0.51
CDH12P55289 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.21■□□□□ 0.51
CDH12P55289 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH12P55289 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH12P55289 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.21■□□□□ 0.51
CDH12P55289 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.21■□□□□ 0.51
CDH12P55289 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.21■□□□□ 0.51
CDH12P55289 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.21■□□□□ 0.51
CDH12P55289 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH12P55289 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH12P55289 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH12P55289 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.21■□□□□ 0.51
CDH12P55289 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH12P55289 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CDH12P55289 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.21■□□□□ 0.5
CDH12P55289 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH12P55289 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CDH12P55289 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CDH12P55289 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH12P55289 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH12P55289 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH12P55289 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH12P55289 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH12P55289 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH12P55289 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH12P55289 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH12P55289 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH12P55289 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms