Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 CCR12P-201ENST00000446203 998 ntBASIC19.24■□□□□ 0.67
CSNK1EP49674 AC091390.4-202ENST00000476426 537 ntBASIC19.24■□□□□ 0.67
CSNK1EP49674 LINC01238-205ENST00000567549 1107 ntBASIC19.24■□□□□ 0.67
CSNK1EP49674 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1EP49674 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1EP49674 AC139887.4-201ENST00000607877 719 ntBASIC19.24■□□□□ 0.67
CSNK1EP49674 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.24■□□□□ 0.67
CSNK1EP49674 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1EP49674 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CSNK1EP49674 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CSNK1EP49674 LINC00565-201ENST00000562710 2331 ntBASIC19.24■□□□□ 0.67
CSNK1EP49674 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1EP49674 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
CSNK1EP49674 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1EP49674 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CSNK1EP49674 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CSNK1EP49674 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1EP49674 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1EP49674 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.23■□□□□ 0.67
CSNK1EP49674 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CSNK1EP49674 AC096733.2-201ENST00000609937 1394 ntBASIC19.23■□□□□ 0.67
CSNK1EP49674 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.23■□□□□ 0.67
CSNK1EP49674 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.23■□□□□ 0.67
CSNK1EP49674 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CSNK1EP49674 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.23■□□□□ 0.67
CSNK1EP49674 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.23■□□□□ 0.67
CSNK1EP49674 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.23■□□□□ 0.67
CSNK1EP49674 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1EP49674 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CSNK1EP49674 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1EP49674 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.23■□□□□ 0.67
CSNK1EP49674 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.23■□□□□ 0.67
CSNK1EP49674 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CSNK1EP49674 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1EP49674 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.23■□□□□ 0.67
CSNK1EP49674 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1EP49674 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1EP49674 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1EP49674 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.23■□□□□ 0.67
CSNK1EP49674 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1EP49674 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CSNK1EP49674 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1EP49674 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.22■□□□□ 0.67
CSNK1EP49674 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1EP49674 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1EP49674 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1EP49674 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1EP49674 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.22■□□□□ 0.67
CSNK1EP49674 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CSNK1EP49674 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.22■□□□□ 0.67
CSNK1EP49674 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.22■□□□□ 0.67
CSNK1EP49674 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.22■□□□□ 0.67
CSNK1EP49674 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
CSNK1EP49674 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.22■□□□□ 0.67
CSNK1EP49674 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CSNK1EP49674 AL358472.4-201ENST00000633140 710 ntBASIC19.22■□□□□ 0.67
CSNK1EP49674 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CSNK1EP49674 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1EP49674 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1EP49674 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CSNK1EP49674 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.22■□□□□ 0.67
CSNK1EP49674 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1EP49674 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1EP49674 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CSNK1EP49674 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1EP49674 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1EP49674 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CSNK1EP49674 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1EP49674 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.21■□□□□ 0.67
CSNK1EP49674 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.21■□□□□ 0.67
CSNK1EP49674 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1EP49674 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1EP49674 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CSNK1EP49674 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
CSNK1EP49674 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CSNK1EP49674 SLC25A1P2-201ENST00000430693 912 ntBASIC19.21■□□□□ 0.67
CSNK1EP49674 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.21■□□□□ 0.67
CSNK1EP49674 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.21■□□□□ 0.67
CSNK1EP49674 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.21■□□□□ 0.67
CSNK1EP49674 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.21■□□□□ 0.67
CSNK1EP49674 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.21■□□□□ 0.67
CSNK1EP49674 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.21■□□□□ 0.67
CSNK1EP49674 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.21■□□□□ 0.67
CSNK1EP49674 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.21■□□□□ 0.67
CSNK1EP49674 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.21■□□□□ 0.67
CSNK1EP49674 AL138966.2-201ENST00000621997 464 ntBASIC19.21■□□□□ 0.67
CSNK1EP49674 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1EP49674 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.21■□□□□ 0.67
CSNK1EP49674 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1EP49674 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1EP49674 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.21■□□□□ 0.67
CSNK1EP49674 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.21■□□□□ 0.67
CSNK1EP49674 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK1EP49674 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK1EP49674 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK1EP49674 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK1EP49674 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.2■□□□□ 0.66
CSNK1EP49674 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CSNK1EP49674 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.2■□□□□ 0.66
CSNK1EP49674 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms