Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.47■■□□□ 1.03
HOXC8P31273 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.47■■□□□ 1.03
HOXC8P31273 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
HOXC8P31273 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.47■■□□□ 1.03
HOXC8P31273 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.47■■□□□ 1.03
HOXC8P31273 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.47■■□□□ 1.03
HOXC8P31273 MYC-208ENST00000641036 567 ntBASIC21.47■■□□□ 1.03
HOXC8P31273 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
HOXC8P31273 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
HOXC8P31273 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HOXC8P31273 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HOXC8P31273 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HOXC8P31273 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HOXC8P31273 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HOXC8P31273 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
HOXC8P31273 AL162377.1-201ENST00000618844 1793 ntBASIC21.46■■□□□ 1.03
HOXC8P31273 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HOXC8P31273 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.46■■□□□ 1.03
HOXC8P31273 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.46■■□□□ 1.03
HOXC8P31273 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HOXC8P31273 AC073314.1-201ENST00000568729 2216 ntBASIC21.46■■□□□ 1.03
HOXC8P31273 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
HOXC8P31273 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.46■■□□□ 1.03
HOXC8P31273 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.46■■□□□ 1.03
HOXC8P31273 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.46■■□□□ 1.03
HOXC8P31273 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.46■■□□□ 1.03
HOXC8P31273 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
HOXC8P31273 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HOXC8P31273 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
HOXC8P31273 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.46■■□□□ 1.03
HOXC8P31273 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
HOXC8P31273 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
HOXC8P31273 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
HOXC8P31273 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HOXC8P31273 AC009237.14-201ENST00000609975 1594 ntBASIC21.45■■□□□ 1.02
HOXC8P31273 AP005212.1-201ENST00000581547 1997 ntBASIC21.45■■□□□ 1.02
HOXC8P31273 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.45■■□□□ 1.02
HOXC8P31273 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.45■■□□□ 1.02
HOXC8P31273 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HOXC8P31273 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.45■■□□□ 1.02
HOXC8P31273 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
HOXC8P31273 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HOXC8P31273 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HOXC8P31273 FAM8A6P-201ENST00000407496 1135 ntBASIC21.45■■□□□ 1.02
HOXC8P31273 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.45■■□□□ 1.02
HOXC8P31273 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HOXC8P31273 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HOXC8P31273 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
HOXC8P31273 CA15P1-201ENST00000481698 905 ntBASIC21.45■■□□□ 1.02
HOXC8P31273 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HOXC8P31273 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.45■■□□□ 1.02
HOXC8P31273 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.45■■□□□ 1.02
HOXC8P31273 AC022616.7-201ENST00000525383 220 ntBASIC21.45■■□□□ 1.02
HOXC8P31273 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HOXC8P31273 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
HOXC8P31273 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HOXC8P31273 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
HOXC8P31273 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HOXC8P31273 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
HOXC8P31273 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HOXC8P31273 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HOXC8P31273 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HOXC8P31273 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HOXC8P31273 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HOXC8P31273 AK4P3-201ENST00000418260 669 ntBASIC21.44■■□□□ 1.02
HOXC8P31273 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.44■■□□□ 1.02
HOXC8P31273 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.44■■□□□ 1.02
HOXC8P31273 AL353719.1-201ENST00000566847 864 ntBASIC21.44■■□□□ 1.02
HOXC8P31273 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HOXC8P31273 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HOXC8P31273 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
HOXC8P31273 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HOXC8P31273 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
HOXC8P31273 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
HOXC8P31273 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
HOXC8P31273 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HOXC8P31273 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
HOXC8P31273 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.43■■□□□ 1.02
HOXC8P31273 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.43■■□□□ 1.02
HOXC8P31273 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
HOXC8P31273 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
HOXC8P31273 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
HOXC8P31273 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HOXC8P31273 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.43■■□□□ 1.02
HOXC8P31273 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.43■■□□□ 1.02
HOXC8P31273 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.43■■□□□ 1.02
HOXC8P31273 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
HOXC8P31273 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HOXC8P31273 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
HOXC8P31273 AL512408.1-201ENST00000569378 2000 ntBASIC21.43■■□□□ 1.02
HOXC8P31273 AL691432.2-201ENST00000607222 2038 ntBASIC21.43■■□□□ 1.02
HOXC8P31273 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HOXC8P31273 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HOXC8P31273 LINC01465-201ENST00000408887 1940 ntBASIC21.42■■□□□ 1.02
HOXC8P31273 TSPY17P-201ENST00000450329 467 ntBASIC21.42■■□□□ 1.02
HOXC8P31273 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.42■■□□□ 1.02
HOXC8P31273 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.42■■□□□ 1.02
HOXC8P31273 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.42■■□□□ 1.02
HOXC8P31273 CKBP1-201ENST00000565489 1086 ntBASIC21.42■■□□□ 1.02
HOXC8P31273 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms