Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.11■□□□□ 0.49
PEPDP12955 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.11■□□□□ 0.49
PEPDP12955 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PEPDP12955 AC087289.5-201ENST00000586076 3175 ntBASIC18.1■□□□□ 0.49
PEPDP12955 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PEPDP12955 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PEPDP12955 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PEPDP12955 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.1■□□□□ 0.49
PEPDP12955 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PEPDP12955 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PEPDP12955 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PEPDP12955 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.1■□□□□ 0.49
PEPDP12955 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.1■□□□□ 0.49
PEPDP12955 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PEPDP12955 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PEPDP12955 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.1■□□□□ 0.49
PEPDP12955 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PEPDP12955 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PEPDP12955 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PEPDP12955 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PEPDP12955 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PEPDP12955 HLA-G-202ENST00000376815 851 ntBASIC18.1■□□□□ 0.49
PEPDP12955 HLA-G-203ENST00000376818 1127 ntBASIC18.1■□□□□ 0.49
PEPDP12955 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PEPDP12955 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
PEPDP12955 AC008687.6-201ENST00000596318 630 ntBASIC18.1■□□□□ 0.49
PEPDP12955 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PEPDP12955 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PEPDP12955 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PEPDP12955 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PEPDP12955 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PEPDP12955 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PEPDP12955 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PEPDP12955 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.09■□□□□ 0.49
PEPDP12955 BX323043.1-201ENST00000641006 1765 ntBASIC18.09■□□□□ 0.49
PEPDP12955 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.09■□□□□ 0.49
PEPDP12955 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PEPDP12955 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PEPDP12955 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.09■□□□□ 0.49
PEPDP12955 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PEPDP12955 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
PEPDP12955 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.09■□□□□ 0.49
PEPDP12955 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
PEPDP12955 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PEPDP12955 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PEPDP12955 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PEPDP12955 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PEPDP12955 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.09■□□□□ 0.49
PEPDP12955 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.09■□□□□ 0.49
PEPDP12955 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PEPDP12955 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PEPDP12955 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.09■□□□□ 0.49
PEPDP12955 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PEPDP12955 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.09■□□□□ 0.49
PEPDP12955 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PEPDP12955 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PEPDP12955 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.09■□□□□ 0.49
PEPDP12955 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.09■□□□□ 0.49
PEPDP12955 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
PEPDP12955 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
PEPDP12955 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
PEPDP12955 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PEPDP12955 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
PEPDP12955 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
PEPDP12955 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.08■□□□□ 0.49
PEPDP12955 KRT8P20-201ENST00000423953 1409 ntBASIC18.08■□□□□ 0.49
PEPDP12955 KRT8P17-201ENST00000453110 1448 ntBASIC18.08■□□□□ 0.49
PEPDP12955 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PEPDP12955 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
PEPDP12955 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
PEPDP12955 AC138932.1-201ENST00000534164 6830 ntBASIC18.08■□□□□ 0.49
PEPDP12955 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PEPDP12955 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.08■□□□□ 0.48
PEPDP12955 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.08■□□□□ 0.48
PEPDP12955 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PEPDP12955 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PEPDP12955 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.08■□□□□ 0.48
PEPDP12955 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PEPDP12955 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.08■□□□□ 0.48
PEPDP12955 AL031963.3-201ENST00000606441 850 ntBASIC18.08■□□□□ 0.48
PEPDP12955 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PEPDP12955 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PEPDP12955 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PEPDP12955 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PEPDP12955 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.08■□□□□ 0.48
PEPDP12955 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.08■□□□□ 0.48
PEPDP12955 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PEPDP12955 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PEPDP12955 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PEPDP12955 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PEPDP12955 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
PEPDP12955 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PEPDP12955 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PEPDP12955 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PEPDP12955 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PEPDP12955 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PEPDP12955 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PEPDP12955 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PEPDP12955 POM121L13P-201ENST00000422362 380 ntBASIC18.07■□□□□ 0.48
PEPDP12955 AC128676.1-201ENST00000454392 318 ntBASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms