Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
TMEM88BA6NKF7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.26
TMEM88BA6NKF7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.89■■□□□ 1.26
TMEM88BA6NKF7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.89■■□□□ 1.26
TMEM88BA6NKF7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.89■■□□□ 1.26
TMEM88BA6NKF7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
TMEM88BA6NKF7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
TMEM88BA6NKF7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC22.89■■□□□ 1.26
TMEM88BA6NKF7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC22.89■■□□□ 1.26
TMEM88BA6NKF7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC22.89■■□□□ 1.26
TMEM88BA6NKF7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC22.89■■□□□ 1.26
TMEM88BA6NKF7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC22.89■■□□□ 1.26
TMEM88BA6NKF7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC22.89■■□□□ 1.26
TMEM88BA6NKF7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC22.89■■□□□ 1.25
TMEM88BA6NKF7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.25
TMEM88BA6NKF7 PMS2P1-201ENST00000431037 1228 ntBASIC22.89■■□□□ 1.25
TMEM88BA6NKF7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
TMEM88BA6NKF7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC22.89■■□□□ 1.25
TMEM88BA6NKF7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC22.89■■□□□ 1.25
TMEM88BA6NKF7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC22.89■■□□□ 1.25
TMEM88BA6NKF7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TMEM88BA6NKF7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
TMEM88BA6NKF7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC22.89■■□□□ 1.25
TMEM88BA6NKF7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
TMEM88BA6NKF7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.89■■□□□ 1.25
TMEM88BA6NKF7 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.89■■□□□ 1.25
TMEM88BA6NKF7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
TMEM88BA6NKF7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TMEM88BA6NKF7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TMEM88BA6NKF7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
TMEM88BA6NKF7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC22.88■■□□□ 1.25
TMEM88BA6NKF7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
TMEM88BA6NKF7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.88■■□□□ 1.25
TMEM88BA6NKF7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TMEM88BA6NKF7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TMEM88BA6NKF7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
TMEM88BA6NKF7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TMEM88BA6NKF7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC22.88■■□□□ 1.25
TMEM88BA6NKF7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC22.88■■□□□ 1.25
TMEM88BA6NKF7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
TMEM88BA6NKF7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC22.88■■□□□ 1.25
TMEM88BA6NKF7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC22.88■■□□□ 1.25
TMEM88BA6NKF7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC22.88■■□□□ 1.25
TMEM88BA6NKF7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TMEM88BA6NKF7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
TMEM88BA6NKF7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TMEM88BA6NKF7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TMEM88BA6NKF7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TMEM88BA6NKF7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TMEM88BA6NKF7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TMEM88BA6NKF7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
TMEM88BA6NKF7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TMEM88BA6NKF7 AC092597.1-201ENST00000487352 616 ntBASIC22.87■■□□□ 1.25
TMEM88BA6NKF7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC22.87■■□□□ 1.25
TMEM88BA6NKF7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
TMEM88BA6NKF7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC22.87■■□□□ 1.25
TMEM88BA6NKF7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TMEM88BA6NKF7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.87■■□□□ 1.25
TMEM88BA6NKF7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TMEM88BA6NKF7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TMEM88BA6NKF7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.87■■□□□ 1.25
TMEM88BA6NKF7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
TMEM88BA6NKF7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
TMEM88BA6NKF7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TMEM88BA6NKF7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
TMEM88BA6NKF7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC22.86■■□□□ 1.25
TMEM88BA6NKF7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TMEM88BA6NKF7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TMEM88BA6NKF7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TMEM88BA6NKF7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
TMEM88BA6NKF7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC22.86■■□□□ 1.25
TMEM88BA6NKF7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
TMEM88BA6NKF7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TMEM88BA6NKF7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TMEM88BA6NKF7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TMEM88BA6NKF7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TMEM88BA6NKF7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC22.85■■□□□ 1.25
TMEM88BA6NKF7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TMEM88BA6NKF7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TMEM88BA6NKF7 MRPL3P1-201ENST00000400109 1033 ntBASIC22.85■■□□□ 1.25
TMEM88BA6NKF7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC22.85■■□□□ 1.25
TMEM88BA6NKF7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC22.85■■□□□ 1.25
TMEM88BA6NKF7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC22.85■■□□□ 1.25
TMEM88BA6NKF7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC22.85■■□□□ 1.25
TMEM88BA6NKF7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC22.85■■□□□ 1.25
TMEM88BA6NKF7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC22.85■■□□□ 1.25
TMEM88BA6NKF7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TMEM88BA6NKF7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.85■■□□□ 1.25
TMEM88BA6NKF7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.84■■□□□ 1.25
TMEM88BA6NKF7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TMEM88BA6NKF7 KRT8P8-201ENST00000434750 1448 ntBASIC22.84■■□□□ 1.25
TMEM88BA6NKF7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
TMEM88BA6NKF7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TMEM88BA6NKF7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC22.84■■□□□ 1.25
TMEM88BA6NKF7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC22.84■■□□□ 1.25
TMEM88BA6NKF7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TMEM88BA6NKF7 AL590627.1-203ENST00000421194 1026 ntBASIC22.84■■□□□ 1.25
TMEM88BA6NKF7 PENK-208ENST00000523051 772 ntTSL 5 BASIC22.84■■□□□ 1.25
TMEM88BA6NKF7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
TMEM88BA6NKF7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms