Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.78■□□□□ 0.6
CNOT1A5YKK6 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT1A5YKK6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CNOT1A5YKK6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT1A5YKK6 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.77■□□□□ 0.6
CNOT1A5YKK6 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.77■□□□□ 0.6
CNOT1A5YKK6 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.77■□□□□ 0.6
CNOT1A5YKK6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.77■□□□□ 0.6
CNOT1A5YKK6 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.77■□□□□ 0.6
CNOT1A5YKK6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.77■□□□□ 0.6
CNOT1A5YKK6 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT1A5YKK6 AC120114.3-201ENST00000611923 658 ntBASIC18.77■□□□□ 0.6
CNOT1A5YKK6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT1A5YKK6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CNOT1A5YKK6 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT1A5YKK6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT1A5YKK6 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT1A5YKK6 AC116351.2-201ENST00000606540 1585 ntBASIC18.77■□□□□ 0.6
CNOT1A5YKK6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT1A5YKK6 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT1A5YKK6 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT1A5YKK6 HMGN1P19-201ENST00000436976 333 ntBASIC18.77■□□□□ 0.6
CNOT1A5YKK6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.77■□□□□ 0.6
CNOT1A5YKK6 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.77■□□□□ 0.6
CNOT1A5YKK6 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CNOT1A5YKK6 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.77■□□□□ 0.6
CNOT1A5YKK6 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
CNOT1A5YKK6 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.77■□□□□ 0.59
CNOT1A5YKK6 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CNOT1A5YKK6 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT1A5YKK6 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT1A5YKK6 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT1A5YKK6 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT1A5YKK6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CNOT1A5YKK6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT1A5YKK6 KRT8P17-201ENST00000453110 1448 ntBASIC18.76■□□□□ 0.59
CNOT1A5YKK6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.76■□□□□ 0.59
CNOT1A5YKK6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT1A5YKK6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT1A5YKK6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.76■□□□□ 0.59
CNOT1A5YKK6 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT1A5YKK6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.76■□□□□ 0.59
CNOT1A5YKK6 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.76■□□□□ 0.59
CNOT1A5YKK6 TUBB8P6-201ENST00000436895 1288 ntBASIC18.76■□□□□ 0.59
CNOT1A5YKK6 AC106795.1-205ENST00000512851 1056 ntBASIC18.76■□□□□ 0.59
CNOT1A5YKK6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT1A5YKK6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.76■□□□□ 0.59
CNOT1A5YKK6 AC092329.2-201ENST00000598402 547 ntBASIC18.76■□□□□ 0.59
CNOT1A5YKK6 AL121672.3-201ENST00000608644 468 ntBASIC18.76■□□□□ 0.59
CNOT1A5YKK6 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT1A5YKK6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.76■□□□□ 0.59
CNOT1A5YKK6 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
CNOT1A5YKK6 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT1A5YKK6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT1A5YKK6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT1A5YKK6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.75■□□□□ 0.59
CNOT1A5YKK6 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.75■□□□□ 0.59
CNOT1A5YKK6 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
CNOT1A5YKK6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT1A5YKK6 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT1A5YKK6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.75■□□□□ 0.59
CNOT1A5YKK6 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT1A5YKK6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT1A5YKK6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.75■□□□□ 0.59
CNOT1A5YKK6 AC079781.3-201ENST00000449110 356 ntBASIC18.75■□□□□ 0.59
CNOT1A5YKK6 AL662844.1-201ENST00000546340 181 ntBASIC18.75■□□□□ 0.59
CNOT1A5YKK6 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
CNOT1A5YKK6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CNOT1A5YKK6 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT1A5YKK6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT1A5YKK6 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT1A5YKK6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT1A5YKK6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT1A5YKK6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT1A5YKK6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
CNOT1A5YKK6 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT1A5YKK6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT1A5YKK6 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CNOT1A5YKK6 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.74■□□□□ 0.59
CNOT1A5YKK6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CNOT1A5YKK6 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT1A5YKK6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CNOT1A5YKK6 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT1A5YKK6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT1A5YKK6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
CNOT1A5YKK6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT1A5YKK6 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT1A5YKK6 AL645929.1-201ENST00000420084 975 ntBASIC18.74■□□□□ 0.59
CNOT1A5YKK6 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.74■□□□□ 0.59
CNOT1A5YKK6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.74■□□□□ 0.59
CNOT1A5YKK6 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT1A5YKK6 BX119927.1-201ENST00000636596 1552 ntBASIC18.74■□□□□ 0.59
CNOT1A5YKK6 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT1A5YKK6 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT1A5YKK6 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT1A5YKK6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT1A5YKK6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT1A5YKK6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT1A5YKK6 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CNOT1A5YKK6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms