Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4-3A0A0B4J1K1 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4-3A0A0B4J1K1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4-3A0A0B4J1K1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4-3A0A0B4J1K1 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4-3A0A0B4J1K1 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4-3A0A0B4J1K1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC11.52□□□□□ -0.57
Trav4-3A0A0B4J1K1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4-3A0A0B4J1K1 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trav4-3A0A0B4J1K1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4-3A0A0B4J1K1 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav4-3A0A0B4J1K1 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4-3A0A0B4J1K1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4-3A0A0B4J1K1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4-3A0A0B4J1K1 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav4-3A0A0B4J1K1 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4-3A0A0B4J1K1 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 AC133083.1-201ENSMUST00000221736 2209 ntBASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Gm38285-201ENSMUST00000192928 922 ntBASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Gm10129-202ENSMUST00000193100 1316 ntBASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav4-3A0A0B4J1K1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4-3A0A0B4J1K1 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4-3A0A0B4J1K1 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4-3A0A0B4J1K1 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4-3A0A0B4J1K1 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4-3A0A0B4J1K1 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4-3A0A0B4J1K1 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4-3A0A0B4J1K1 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4-3A0A0B4J1K1 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms