Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC8.34□□□□□ -1.07
ZC3H4Q9UPT8 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC8.34□□□□□ -1.07
ZC3H4Q9UPT8 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC8.34□□□□□ -1.07
ZC3H4Q9UPT8 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC8.34□□□□□ -1.07
ZC3H4Q9UPT8 SNRPCP6-201ENST00000528310 210 ntBASIC8.34□□□□□ -1.07
ZC3H4Q9UPT8 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC8.34□□□□□ -1.07
ZC3H4Q9UPT8 AC092747.2-201ENST00000545069 983 ntBASIC8.34□□□□□ -1.07
ZC3H4Q9UPT8 AC051619.2-201ENST00000559063 397 ntBASIC8.34□□□□□ -1.07
ZC3H4Q9UPT8 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
ZC3H4Q9UPT8 AC133552.5-201ENST00000604266 540 ntBASIC8.34□□□□□ -1.07
ZC3H4Q9UPT8 AL022154.1-201ENST00000604698 785 ntBASIC8.34□□□□□ -1.07
ZC3H4Q9UPT8 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
ZC3H4Q9UPT8 AC091304.9-201ENST00000612091 226 ntBASIC8.34□□□□□ -1.07
ZC3H4Q9UPT8 AC112204.3-201ENST00000623822 332 ntBASIC8.34□□□□□ -1.07
ZC3H4Q9UPT8 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC8.34□□□□□ -1.07
ZC3H4Q9UPT8 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
ZC3H4Q9UPT8 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
ZC3H4Q9UPT8 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
ZC3H4Q9UPT8 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC8.34□□□□□ -1.07
ZC3H4Q9UPT8 AC090643.1-201ENST00000623600 3100 ntBASIC8.34□□□□□ -1.07
ZC3H4Q9UPT8 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
ZC3H4Q9UPT8 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
ZC3H4Q9UPT8 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
ZC3H4Q9UPT8 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
ZC3H4Q9UPT8 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC8.34□□□□□ -1.07
ZC3H4Q9UPT8 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC8.34□□□□□ -1.07
ZC3H4Q9UPT8 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
ZC3H4Q9UPT8 DLEU2L-201ENST00000371086 3555 ntBASIC8.34□□□□□ -1.07
ZC3H4Q9UPT8 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.08
ZC3H4Q9UPT8 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC8.34□□□□□ -1.08
ZC3H4Q9UPT8 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC8.34□□□□□ -1.08
ZC3H4Q9UPT8 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC8.34□□□□□ -1.08
ZC3H4Q9UPT8 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 Z83820.1-201ENST00000456978 1499 ntBASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 RNU6-181P-201ENST00000363225 107 ntBASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 RNU5F-7P-201ENST00000363696 115 ntBASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 AC004386.1-201ENST00000393214 761 ntBASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 AL022100.1-202ENST00000421214 548 ntBASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 RPL12P12-201ENST00000424633 501 ntBASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 AC000111.3-201ENST00000433478 193 ntBASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 LSM3P3-201ENST00000436601 306 ntBASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 AMYP1-201ENST00000440059 1023 ntBASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 AL157827.1-201ENST00000447622 132 ntBASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 AL034418.1-201ENST00000448675 860 ntBASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 AC079776.3-201ENST00000450665 370 ntBASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 RPS27AP2-201ENST00000457576 465 ntBASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 NXT1P1-201ENST00000458481 316 ntBASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 AL672167.3-201ENST00000465951 960 ntBASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 AC074386.1-201ENST00000476560 767 ntBASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 AL358832.1-201ENST00000497800 389 ntBASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 ARL4AP2-201ENST00000507378 601 ntBASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 OR5AL2P-201ENST00000532185 920 ntBASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 AC026898.1-201ENST00000586404 571 ntBASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 AC008521.2-201ENST00000591021 259 ntBASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 AL590032.1-201ENST00000604920 252 ntBASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 AL355333.1-201ENST00000605632 279 ntBASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 DUXAP9-208ENST00000622815 614 ntBASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 AL354702.2-202ENST00000641481 890 ntBASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 GPI-202ENST00000415930 4000 ntTSL 2 BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 ZNF680P1-201ENST00000436625 1469 ntBASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
ZC3H4Q9UPT8 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 RPL5P5-201ENST00000392009 893 ntBASIC8.32□□□□□ -1.08
ZC3H4Q9UPT8 AC003045.1-201ENST00000398779 713 ntBASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms