Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 Y_RNA.431-201ENST00000384086 102 ntBASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 OR2W4P-201ENST00000406496 926 ntBASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 MIR1305-201ENST00000408300 86 ntBASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 ISCA1P6-201ENST00000427740 390 ntBASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 SAR1AP4-201ENST00000429225 591 ntBASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 AL589990.1-201ENST00000432210 592 ntTSL 3 BASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 AC017015.1-201ENST00000477387 286 ntBASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 RN7SL152P-201ENST00000484176 298 ntBASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 RPL39P36-201ENST00000490784 156 ntBASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 PGAM4P2-201ENST00000512491 721 ntBASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 IGHVII-51-2-201ENST00000519778 259 ntBASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 TPM3P3-201ENST00000521343 354 ntBASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 SMARCE1P3-201ENST00000553649 1231 ntBASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 RN7SL32P-201ENST00000580514 281 ntBASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 TPMTP1-201ENST00000592307 737 ntBASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 VN1R80P-201ENST00000597126 338 ntBASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 KC877982.1-201ENST00000602313 470 ntBASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 AC027243.2-201ENST00000602530 724 ntBASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 AC011816.2-201ENST00000607089 556 ntBASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 AC091905.1-201ENST00000624400 311 ntBASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC7.88□□□□□ -1.15
LIMD1Q9UGP4 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 FAM13A-205ENST00000503556 3386 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 CCDC162P-202ENST00000368966 6751 ntBASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 AC108099.1-201ENST00000564402 3258 ntBASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 AC087045.3-201ENST00000623046 2468 ntBASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 AL645937.1-201ENST00000641739 1652 ntBASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 USP3-201ENST00000268049 5311 ntTSL 5 BASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 ZBTB8OSP1-201ENST00000342688 498 ntBASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 RNU6-1322P-201ENST00000364309 107 ntBASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 SNORA51.2-201ENST00000364595 132 ntBASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 MIR551B-201ENST00000384984 96 ntBASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 AL390316.1-201ENST00000406279 553 ntBASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 U3.31-201ENST00000408113 216 ntBASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 JKAMPP1-201ENST00000413804 919 ntBASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 FGF12-202ENST00000430714 603 ntTSL 2 BASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 ANXA2P2-201ENST00000435128 1020 ntBASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 SDCBPP1-201ENST00000440192 890 ntBASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 NDUFA5P7-201ENST00000452914 242 ntBASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 NAF1-205ENST00000509434 385 ntTSL 3 BASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 RNU6-1045P-201ENST00000516321 107 ntBASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 COX6B1P4-201ENST00000519826 484 ntBASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 IGLVVI-25-1-201ENST00000521893 249 ntBASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 AL121821.2-201ENST00000556081 394 ntBASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 IGLJCOR18-201ENST00000584002 424 ntBASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC7.87□□□□□ -1.15
LIMD1Q9UGP4 IGKV2OR2-7-201ENST00000604652 304 ntBASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms