Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 YWHAEP1-201ENST00000453697 763 ntBASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 TPRKBP1-201ENST00000456243 481 ntBASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 RPL35AP19-201ENST00000469425 329 ntBASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 AC090543.1-201ENST00000492168 485 ntBASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 OR4A43P-201ENST00000532938 908 ntBASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 OR8X1P-201ENST00000534542 869 ntBASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 AL133247.2-201ENST00000603236 482 ntBASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 AC108738.1-201ENST00000603703 237 ntBASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 SNORA17.5-201ENST00000630429 132 ntBASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.09□□□□□ -1.44
BLOC1S4Q9NUP1 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
BLOC1S4Q9NUP1 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 AC092451.3-201ENST00000625067 1343 ntBASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 AC092681.1-201ENST00000297369 291 ntBASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 RN7SKP124-201ENST00000364730 341 ntBASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 AL136131.1-201ENST00000406079 803 ntBASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 SRSF1P1-201ENST00000424058 520 ntBASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 AC023141.9-201ENST00000458734 412 ntBASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 PSAT1P4-201ENST00000466500 526 ntBASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 AC117394.1-201ENST00000477323 567 ntBASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 RPSAP51-201ENST00000497462 645 ntBASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 AC090638.1-201ENST00000498296 909 ntBASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 AC109464.1-201ENST00000511091 819 ntBASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 IGHV3-63-201ENST00000518422 341 ntBASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 SNRPGP1-201ENST00000553864 222 ntBASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 AC022404.1-201ENST00000555320 273 ntBASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 AC015720.2-201ENST00000567709 334 ntBASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 AC000068.2-201ENST00000608816 460 ntBASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 AC026124.2-201ENST00000621847 656 ntBASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BLOC1S4Q9NUP1 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 RN7SKP293-201ENST00000411389 296 ntBASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 OR6K4P-201ENST00000423179 955 ntBASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 MTND4LP14-201ENST00000429447 288 ntBASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 PA2G4P6-201ENST00000438325 1197 ntBASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 SETP20-201ENST00000457046 852 ntBASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 AC021146.7-201ENST00000509604 775 ntBASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 MTND6P2-201ENST00000512226 524 ntBASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 AC034244.2-201ENST00000514668 858 ntBASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 SNORD95-201ENST00000579879 68 ntBASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 AL021368.1-201ENST00000607490 540 ntBASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 AC135803.1-201ENST00000608748 565 ntBASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 AL162574.1-201ENST00000615702 950 ntBASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms