Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 TMSB4XP4-201ENST00000323496 618 ntBASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 RAB5CP1-201ENST00000395972 580 ntBASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 RNA5SP487-201ENST00000410186 122 ntBASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 SEPT7P8-201ENST00000413308 775 ntBASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 RPS29P14-201ENST00000431518 171 ntBASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 NFYAP1-201ENST00000431953 972 ntBASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 AL390119.1-201ENST00000440329 312 ntBASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 AL161636.2-201ENST00000445179 927 ntBASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 GAPDHP14-201ENST00000450472 937 ntBASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 YWHAEP1-201ENST00000453697 763 ntBASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 AC079168.1-201ENST00000458741 345 ntBASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 AC093827.1-201ENST00000480094 861 ntBASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 AL049874.2-201ENST00000492636 288 ntBASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 TMEM97P2-201ENST00000517841 403 ntBASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 MTCYBP13-201ENST00000578634 1093 ntBASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 AC000068.2-201ENST00000608816 460 ntBASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 AC073575.2-201ENST00000614212 627 ntBASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 AC091932.2-201ENST00000623014 291 ntBASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 RNA5SP234-201ENST00000363916 119 ntBASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 RNU6-1320P-201ENST00000390838 107 ntBASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 RNU6-1269P-201ENST00000391139 107 ntBASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 AL031985.1-201ENST00000392713 418 ntBASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 GNG5P5-201ENST00000420444 220 ntBASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 RPS27AP2-201ENST00000457576 465 ntBASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 RNU6-599P-201ENST00000459383 107 ntBASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 RNU6-1193P-201ENST00000459461 107 ntBASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 CBX1P5-201ENST00000475330 559 ntBASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 RN7SL423P-201ENST00000486202 304 ntBASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 EIF1P7-201ENST00000487533 337 ntBASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 EIF3KP3-201ENST00000514461 639 ntBASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 RNA5SP230-201ENST00000517039 122 ntBASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 BLZF2P-201ENST00000553776 1130 ntBASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 MIR4660-201ENST00000583549 74 ntBASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 AC010245.2-201ENST00000606908 1167 ntBASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 SNORA35B-201ENST00000607417 129 ntBASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 RNU6-368P-201ENST00000620928 107 ntBASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 RNU6-538P-201ENST00000622329 107 ntBASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 AC138965.3-201ENST00000623875 498 ntBASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 AL031595.2-201ENST00000624215 19071 ntBASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 AC092376.2-201ENST00000622621 4116 ntBASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.42□□□□□ -1.54
LRRC40Q9H9A6 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 178.2 ms