Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AL359742.1-201ENST00000622497 540 ntBASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 AC010266.2-201ENST00000564741 3255 ntBASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 AL022322.2-201ENST00000624072 20397 ntBASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 RN7SKP292-201ENST00000365522 317 ntBASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 RNA5SP122-201ENST00000384457 108 ntBASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 AL035079.1-201ENST00000405210 287 ntBASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 AC002504.1-201ENST00000438281 691 ntBASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 HMGN1P2-201ENST00000445197 310 ntBASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 AC012512.1-201ENST00000446594 718 ntBASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 MTND4LP12-201ENST00000448237 295 ntBASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 AC019084.1-201ENST00000457337 432 ntBASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 RN7SL168P-201ENST00000463821 279 ntBASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 AC090638.1-201ENST00000498296 909 ntBASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 AP001960.1-201ENST00000506494 658 ntBASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 RNA5SP373-201ENST00000517271 95 ntBASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 AP006245.2-201ENST00000522004 300 ntBASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 AC084033.1-201ENST00000550830 633 ntBASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 AC010547.6-201ENST00000571789 193 ntBASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 AL499605.1-201ENST00000604628 403 ntBASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 AC108359.1-201ENST00000616451 1211 ntBASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 AC037198.3-201ENST00000616754 526 ntBASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 AC244100.4-201ENST00000617747 388 ntBASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 TCP11X1-202ENST00000622971 1372 ntBASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 AL672167.1-204ENST00000641875 3017 ntBASIC4.38□□□□□ -1.71
HDHD3Q9BSH5 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 SMG1P4-204ENST00000523028 4131 ntBASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 RNU1-146P-201ENST00000364015 165 ntBASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 AL390316.1-201ENST00000406279 553 ntBASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 RNA5SP487-201ENST00000410186 122 ntBASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 AL691447.1-201ENST00000419456 387 ntBASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 MTND6P12-201ENST00000428247 522 ntBASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 RPL7AP61-201ENST00000443410 636 ntBASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 AL157385.1-201ENST00000446973 268 ntBASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 RN7SL51P-201ENST00000468230 285 ntBASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 PSMA2P2-201ENST00000504319 686 ntBASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 AC006427.1-201ENST00000514359 712 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms