Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC107993.1-201ENST00000591343 684 ntBASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 AC084373.1-201ENST00000603311 235 ntBASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 AC093765.1-201ENST00000603758 881 ntBASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 AC121247.2-201ENST00000604776 136 ntBASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 AC004775.1-201ENST00000607389 753 ntBASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 AL121890.3-201ENST00000618494 516 ntBASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 AL136228.1-201ENST00000622221 319 ntBASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 AL137141.1-201ENST00000624622 4836 ntBASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 SNORA70H-201ENST00000383910 135 ntBASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 SNORA70J-201ENST00000384182 135 ntBASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 TRAV35-201ENST00000390462 330 ntBASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 AC016739.1-201ENST00000405359 345 ntBASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 SLC20A1P1-201ENST00000413906 956 ntBASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 NMD3P2-201ENST00000421815 761 ntBASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 GAPDHP75-201ENST00000433910 943 ntBASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 AL133217.1-201ENST00000450980 425 ntBASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 LRRC37A14P-201ENST00000452297 462 ntBASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 GEMIN2P1-201ENST00000454246 752 ntBASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 CST12P-201ENST00000457644 362 ntBASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 RPL32P14-201ENST00000463196 378 ntBASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 AC108734.3-201ENST00000481241 1165 ntBASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 AC008549.1-201ENST00000512900 643 ntBASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 TPM3P3-201ENST00000521343 354 ntBASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 OR4A42P-201ENST00000531397 938 ntBASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 OR4A40P-201ENST00000533878 948 ntBASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 AC090651.1-201ENST00000567865 634 ntBASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 AC124856.1-201ENST00000600819 896 ntBASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 AC025588.2-201ENST00000604851 466 ntBASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 RNU6-1192P-201ENST00000612197 107 ntBASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 AC116165.2-201ENST00000616705 206 ntBASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 RNU6-489P-201ENST00000618289 107 ntBASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 AL669942.2-201ENST00000620352 697 ntBASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 AC011504.1-201ENST00000623331 4103 ntBASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 AC009120.7-201ENST00000623452 780 ntBASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 AP003400.5-201ENST00000624827 617 ntBASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 AC020656.2-201ENST00000613291 5309 ntBASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDK5RAP1Q96SZ6 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AL353763.1-201ENST00000624467 1628 ntBASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms